Parental gene:

MTX2, ENSCPOG00000011099

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:14015095..14066170(-)


>ENSCPOG00000011099
AGTCGGGCGCGGGGCTGCTCAGCCGACATGTCTTTAGTGGCGGAAGCGTTCGTCTCGCAGATCGCAGCTACAGAACCTTG
GCCTGAAAATGCTACATTGTATCAGCAACTGAAAGGGGAGCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGCCGTGC
AGGCCTTTTTGCAGATGTGTAATCTGCCCGTCAAAGTGGTTTTTAGGGCAAATGCAGAATATATGTCTCCGTCTGGTAAA
GTACCTTTTATTCATGGGAATCAAGTAGTATCAGAACTTGGTCCAATAGTTCAATTCGTTAAAGCCAAGGGCCATTGTCT
TAGTGATGGGTTGGATGAAGTCCAAAAAGCAGAAATGAAGGCTTACATGGAATTAGTCAACAATATGTTGTTGACTGCAG
AGTTATATCTTCAGTGGTGTGATGAAGCTACTGTAGGGGAGATTACTCATGCTAGGTATGGATCTCCTTACCCTTGGCCT
CTGAATCATATTTTGGCCTATCAGAAACAGTGGGAAGTCAAGCGGAAGATGAAAGCTATTGGATGGGGAAACAAGACTCT
GGACCAGGTTTTAGAAGATGTTGACCAGTGCTGTCAAGCTCTTTCTCAAAGACTGGGAACACAACCGTACTTTTTCAATA
AGCAGCCGACTGAACTTGATGCATTGGTCTTTGGCCACCTGTACACCATTCTCACCACACAGCTGACCAACGATGAACTG
TCTGAGAAGGTGAAAAACTACAGCAACCTCCTTGCCTTCTGTAGAAGAATTGAACAGCACTATTTTGAAGATCGTGGCAA
AGGCAGGTTGTCT

Library Parental gene expression (RPM)
SRP017611_brain 15 .36 RPM
SRP017611_kidney 29 .84 RPM
SRP017611_liver 14 .80 RPM
SRP040447_lung 14 .68 RPM
SRP040447_skeletal_muscle 10 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009655 ortholog_one2one 1 retrogene
retro_chof_2429,
Dipodomys ordii ENSDORG00000003848 ortholog_one2one 2 retrogenes
retro_dord_159, retro_dord_192,
Homo sapiens ENSG00000128654 ortholog_one2one 1 retrogene
retro_hsap_3780,
Macaca mulatta ENSMMUG00000010185 ortholog_one2one 1 retrogene
retro_mmul_1643,
Nomascus leucogenys ENSNLEG00000006020 ortholog_one2one 1 retrogene
retro_nleu_1117,
Pan troglodytes ENSPTRG00000012674 ortholog_one2one 1 retrogene
retro_ptro_2561,
Sarcophilus harrisii ENSSHAG00000016381 ortholog_one2one 1 retrogene
retro_shar_162,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_218 69.31 71.59
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Download FASTA sequences of all ENSCPOG00000011099 retrocopies