Parental gene: | MTX2, ENSPTRG00000012674 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2B:180748797..180811517(+) |
>ENSPTRG00000012674
ATGTCTCTAGTGGCGGAAGCCTTCGTCTCCCAGATTGCAGCTGCAGAACCTTGGCCTGAAAATGCTACATTATATCAGCA
ATTGAAAGGGGAGCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGC
CTATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTCCCTTTTATTCATGTGGGAAATCAA
GTAGTATCAGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGATGGGCTGGAGGAAGTCCA
AAAAGCAGAAATGAAAGCTTACATGGAATTAGTCAACAATATGCTGTTGACAGCAGAGCTGTATCTTCAGTGGTGTGATG
AAGCTACAGTAGGGGAGATCACTCATGCTAGGTATGGATCTCCTTACCCTTGGCCTCTGAATCATATTTTGGCCTATCAA
AAACAGTGGGAAGTCAAACGTAAGATGAAAGCTATTGGATGGGGAAAGAAGACTCTGGACCAGGTCTTAGAGGATGTAGA
CCAGTGCTGTCAAGCTCTCTCTCAAAGACTGGGAACACAACCGTATTTCTTCAATAAGCAGCCTACTGAACTTGACGCAC
TGGTATTTGGCCATCTATACACCATTCTTACCACACAATTGACAAATGATGAACTTTCTGAGAAGGTGAAAAACTATAGC
AACCTCCTTGCTTTCTGTAGGAGAATTGAACAGCACTATTTTGAAGATCGTGGTAAAGGCAGGCTGTCATAG
ATGTCTCTAGTGGCGGAAGCCTTCGTCTCCCAGATTGCAGCTGCAGAACCTTGGCCTGAAAATGCTACATTATATCAGCA
ATTGAAAGGGGAGCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGC
CTATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTCCCTTTTATTCATGTGGGAAATCAA
GTAGTATCAGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGATGGGCTGGAGGAAGTCCA
AAAAGCAGAAATGAAAGCTTACATGGAATTAGTCAACAATATGCTGTTGACAGCAGAGCTGTATCTTCAGTGGTGTGATG
AAGCTACAGTAGGGGAGATCACTCATGCTAGGTATGGATCTCCTTACCCTTGGCCTCTGAATCATATTTTGGCCTATCAA
AAACAGTGGGAAGTCAAACGTAAGATGAAAGCTATTGGATGGGGAAAGAAGACTCTGGACCAGGTCTTAGAGGATGTAGA
CCAGTGCTGTCAAGCTCTCTCTCAAAGACTGGGAACACAACCGTATTTCTTCAATAAGCAGCCTACTGAACTTGACGCAC
TGGTATTTGGCCATCTATACACCATTCTTACCACACAATTGACAAATGATGAACTTTCTGAGAAGGTGAAAAACTATAGC
AACCTCCTTGCTTTCTGTAGGAGAATTGAACAGCACTATTTTGAAGATCGTGGTAAAGGCAGGCTGTCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .63 RPM |
| SRP007412_cerebellum | 13 .16 RPM |
| SRP007412_heart | 18 .92 RPM |
| SRP007412_kidney | 34 .39 RPM |
| SRP007412_liver | 11 .72 RPM |
| SRP007412_testis | 52 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009655 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000011099 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000003848 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000128654 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010185 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006020 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016381 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2561 | 78.83 | 51.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000012674 retrocopies