Parental gene:

UBE2A, ENSCPOG00000011908

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_46:135228..143601(-)


>ENSCPOG00000011908
ATGTCCACCCCGGCTCGGCGGCGCCTCATGAGGGACTTCAAGAGGCTGCAGGAAGATCCTCCAGCTGGAGTCAGTGGGGC
TCCGTCAGAGAACAACATAATGGTTTGGAACGCGGTCATTTTTGGGCCTGAAGGGACCCCATTTGAGGATGGAACATTTA
AACTTACAATAGAATTCACTGAAGAATATCCGAATAAACCACCTACAGTTAGATTTATCTCTAAGATGTTTCATCCAAAT
GTCTACGCAGATGGTAGTATATGTCTGGATATACTTCAGAACCGTTGGAGTCCAACTTATGATGTGTCTTCCATTTTAAC
ATCCATACAGTCTCTATTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACA
AGAGGGAATATGAAAAACGCGTTTCTGCAATCGTAGAACAGAGCTGGCGTGATTGT

Library Parental gene expression (RPM)
SRP017611_liver 18 .72 RPM
SRP017611_kidney 14 .87 RPM
SRP017611_brain 20 .25 RPM
SRP040447_lung 15 .21 RPM
SRP040447_skeletal_muscle 18 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001079 ortholog_one2one 1 retrogene
retro_chof_1316,
Callithrix jacchus ENSCJAG00000005098 ortholog_one2one 2 retrogenes
retro_cjac_1180, retro_cjac_3862,
Dasypus novemcinctus ENSDNOG00000007060 ortholog_one2one 1 retrogene
retro_dnov_215,
Macropus eugenii ENSMEUG00000003026 ortholog_one2one 1 retrogene
retro_meug_2180,
Monodelphis domestica ENSMODG00000010209 ortholog_one2one 1 retrogene
retro_mdom_341,
Oryctolagus cuniculus ENSOCUG00000016739 ortholog_one2many 1 retrogene
retro_ocun_183,
Otolemur garnettii ENSOGAG00000024335 ortholog_one2one 1 retrogene
retro_ogar_3203,
Procavia capensis ENSPCAG00000005045 ortholog_one2one 1 retrogene
retro_pcap_222,
Sus scrofa ENSSSCG00000012621 ortholog_one2one 1 retrogene
retro_sscr_29,
Tarsius syrichta ENSTSYG00000000888 ortholog_one2one 1 retrogene
retro_tsyr_676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_489 81.93 54.61
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Download FASTA sequences of all ENSCPOG00000011908 retrocopies