Parental gene: | PSMA5, ENSCPOG00000013670 |
| Aliases: | None |
| Description: | Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:H0VP94] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_2:33563413..33582096(-) |
>ENSCPOG00000013670
ATGTTCCTCACGCGATCGGAATACGACAGAGGTGTGAATACTTTTTCCCCTGAAGGAAGACTCTTTCAAGTGGAATATGC
CATTGAGGCTATCAAGCTTGGTTCTACAGCCATTGGGATCCAGACATCGGAAGGTGTATGCCTAGCTGTGGAGAAGAGAA
TTACTTCCCCACTTATGGAGCCTAGCAGCATTGAGAAGATAGTAGAGATTGATGCTCATATAGGTTGTGCCATGAGTGGG
CTAATTGCTGATGCTAAGACTTTAATTGATAAGGCAAGAGTGGAAACACAGAACCATTGGTTTACCTATAATGAGACAAT
GACAGTAGAGAGTGTGACCCAAGCTGTGTCTAATCTGGCCCTACAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGT
CTCGTCCCTTTGGAGTAGCACTGTTATTTGGAGGAGTTGATGAGAAGGGACCCCAGCTGTTTCATATGGACCCATCTGGG
ACCTTTGTACAGTGTGATGCTCGAGCAATTGGCTCTGCTTCAGAGGGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAA
GTCTATGACACTGAAAGAAGCCATCAAGTCTTCACTTATCATTCTCAAGCAAGTAATGGAAGAGAAGCTGAATGCAACTA
ACATAGAGCTAGCTACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGAGGTTATTAAGGAC
ATTTAA
ATGTTCCTCACGCGATCGGAATACGACAGAGGTGTGAATACTTTTTCCCCTGAAGGAAGACTCTTTCAAGTGGAATATGC
CATTGAGGCTATCAAGCTTGGTTCTACAGCCATTGGGATCCAGACATCGGAAGGTGTATGCCTAGCTGTGGAGAAGAGAA
TTACTTCCCCACTTATGGAGCCTAGCAGCATTGAGAAGATAGTAGAGATTGATGCTCATATAGGTTGTGCCATGAGTGGG
CTAATTGCTGATGCTAAGACTTTAATTGATAAGGCAAGAGTGGAAACACAGAACCATTGGTTTACCTATAATGAGACAAT
GACAGTAGAGAGTGTGACCCAAGCTGTGTCTAATCTGGCCCTACAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGT
CTCGTCCCTTTGGAGTAGCACTGTTATTTGGAGGAGTTGATGAGAAGGGACCCCAGCTGTTTCATATGGACCCATCTGGG
ACCTTTGTACAGTGTGATGCTCGAGCAATTGGCTCTGCTTCAGAGGGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAA
GTCTATGACACTGAAAGAAGCCATCAAGTCTTCACTTATCATTCTCAAGCAAGTAATGGAAGAGAAGCTGAATGCAACTA
ACATAGAGCTAGCTACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGAGGTTATTAAGGAC
ATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 55 .63 RPM |
| SRP017611_kidney | 49 .20 RPM |
| SRP017611_brain | 24 .39 RPM |
| SRP040447_lung | 42 .67 RPM |
| SRP040447_skeletal_muscle | 42 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000011835 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012916 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000068749 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000008863 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019868 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006830 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1063 | 79.55 | 72.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000013670 retrocopies