Parental gene:

CSA.10341, ENSCSAVG00000001800

Aliases:None
Description:None
Organism:Pacific transparent sea squirt (Ciona savignyi)
Coordinates:reftig_580:6224..28366(-)


>ENSCSAVG00000001800
ATGGGTTGCACAGTTTCAACAGATGATAAAGCAGCAAATGAAAGGTCGAGAGCCATTGACCGAAATTTACGAGTGGATGG
CGACAAACAATCTAGAGAAGTAAAGTTGCTTTTGCTTGGTGCTGGTGAATCCGGGAAAAGCACAATTGTCAAGCAAATGA
AAATTATTCACGAAGATGGTTACTCTGAAGAAGAATGCTTGCAGTACAAAGCAGTTGTTTACAGTAACACTTTACAATCT
CTTATCACAATTGTTCGTGCCATGGGAAACTTAAAAATTGATTTTGGTTCGCCAGAACGTGCGGATGATGCGAGGCAGTT
GTTTTCACTTGCTGGCTCACTGGATGATGGAGAAATGACCCAGGAGCTCGGTGATTGCATGAAACGAATGTGGAGTGACA
AGGGGGTACAGGTGTGCTTCAGTAGATCTCGGGAGTTTCAACTAAACGACTCAGCTCAATACTATCTGGACAGTCTGGAT
CGGTTGGTTGCCAGCGATTACATTCCAACCGAACAGGATGATGTACTAAGGACTAGAGTTAAAACCACCGGCATTGTGGA
AGTTCACTTTAATTTTAAAGGGTTAACTTTCAAGATGTTTGATGTTGGTGGACAGCGTTCAGAAAGAAAGAAATGGATTC
ACTGTTTTGAAGGAGTAACTGCTATAATTTTCTGTGTTGCTCTATCAGCTTATGATCTGGTTCTTGCAGAAGATGAAGAA
ATGAACCGAATGCATGAGTCAATGAAACTTTTTGACTCTATTTGCAACAATAAATGGTTTACCGAAACTTCCATCATTCT
ATTCTTGAACAAGAAGGACTTGTTTGAGGTGAAAATTCTAAAGTCCCCTCTTACAATCTGCTTTCCTGAATACCCAGGCC
AGAATACTTATGAAGAAGCAGCTGCATACATCCAGCTTCAGTTTGAAGATTTAAACAAGCGCAAAGACAGCAAGGAAATT
TATACTCACTTCACATGTGCAACTGATACAACGAACATACAGTTTGTGTTTGATGCTGTCACCGATGTCATCATCAAAAA
TAATTTAAAGGACTGTGGTCTCTTTTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010970 ortholog_one2many 1 retrogene
retro_acar_40,
Choloepus hoffmanni ENSCHOG00000012718 ortholog_one2many 1 retrogene
retro_chof_359,
Ciona intestinalis ENSCING00000005305 ortholog_one2one 1 retrogene
retro_cint_14,
Callithrix jacchus ENSCJAG00000004925 ortholog_one2many 1 retrogene
retro_cjac_1091,
Danio rerio ENSDARG00000021647 ortholog_one2many 1 retrogene
retro_drer_19,
Felis catus ENSFCAG00000007008 ortholog_one2many 1 retrogene
retro_fcat_157,
Microcebus murinus ENSMICG00000011752 ortholog_one2many 1 retrogene
retro_mmur_1103,
Otolemur garnettii ENSOGAG00000012525 ortholog_one2many 1 retrogene
retro_ogar_1470,
Otolemur garnettii ENSOGAG00000013587 ortholog_one2many 1 retrogene
retro_ogar_993,
Rattus norvegicus ENSRNOG00000016592 ortholog_one2many 1 retrogene
retro_rnor_505,
Tupaia belangeri ENSTBEG00000015771 ortholog_one2many 1 retrogene
retro_tbel_2449,
Tarsius syrichta ENSTSYG00000000556 ortholog_one2many 1 retrogene
retro_tsyr_288,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_csav_19 62.71 99.72
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCSAVG00000001800 retrocopies