Parental gene: | TMEM230, ENSDNOG00000005724 |
| Aliases: | None |
| Description: | transmembrane protein 230 [Source:HGNC Symbol;Acc:15876] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_907:15556..54312(-) |
>ENSDNOG00000005724
ATGCGGGCGCGGACCGAGGGCCGGCTTGGCGCTGCGCGCCTGTGTCAACTTGTTATGATGCCGTCTCGTACCAACCTGGC
TACTGGAATCCCCAGTAGTAAAGTGAAGTACTCCAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTCAAGA
AGAGCCCTCCTAAGATTCCTTATAAGGCCATCGCACTTGCCACCGTGCTGTTTTTGATCGGTGCCTTTCTTATCATCATT
GGCTCCCTCCTGCTGGCCGGCTACATCAGCAAGGGGGGGGCGGACCGGGCCGTGCCCGTGCTCATCATCGGCATCCTGGT
GTTCCTGCCCGGCTTCTACCACCTGCGCATCGCCTACTACGCCTCCCAGGGCTACCGGGGCTACTCCTACGACGACATCC
CCGACTTCGACGACTAG
ATGCGGGCGCGGACCGAGGGCCGGCTTGGCGCTGCGCGCCTGTGTCAACTTGTTATGATGCCGTCTCGTACCAACCTGGC
TACTGGAATCCCCAGTAGTAAAGTGAAGTACTCCAGGCTCTCCAGCACAGACGATGGCTACATTGACCTTCAGTTCAAGA
AGAGCCCTCCTAAGATTCCTTATAAGGCCATCGCACTTGCCACCGTGCTGTTTTTGATCGGTGCCTTTCTTATCATCATT
GGCTCCCTCCTGCTGGCCGGCTACATCAGCAAGGGGGGGGCGGACCGGGCCGTGCCCGTGCTCATCATCGGCATCCTGGT
GTTCCTGCCCGGCTTCTACCACCTGCGCATCGCCTACTACGCCTCCCAGGGCTACCGGGGCTACTCCTACGACGACATCC
CCGACTTCGACGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 20 .03 RPM |
| SRP012922_cerebellum | 12 .23 RPM |
| SRP012922_heart | 3 .94 RPM |
| SRP012922_kidney | 19 .44 RPM |
| SRP012922_liver | 9 .91 RPM |
| SRP012922_lung | 22 .60 RPM |
| SRP012922_quadricep_muscle | 5 .19 RPM |
| SRP012922_spleen | 22 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009083 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000006063 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000006039 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000023089 | possible_ortholog | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000008611 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002863 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019378 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_373 | 67.59 | 77.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_803 | 51.75 | 80.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1004 | 70.08 | 89.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2377 | 69.31 | 71.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2534 | 73.02 | 90.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000005724 retrocopies