Parental gene:

HADHA, ENSDNOG00000006972

Aliases:None
Description:hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit [Source:HGNC Symbol;Acc:4801]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_820:72051..132302(-)


>ENSDNOG00000006972
ATGGTGGCTTCCCGGGCAATTGGCAGCCTTAGACGCTTCGCTGCCTCCAGGACTCTTCGCTCCCCAGGTTATGTTTGCCG
TGACTTTACAGGATCCCCTGCTTCGATGGCCAGAACCCATATTAACTATGGAGTCAAAGGGGATGTGGCAGTTGTCCGAA
TTAACTCACCCAACTCAAAGGTAAATACACTGAATAAAGAACTGCAGTCAGAGTTCTTAGAAGTAATGAATGAAATCTGG
GCTAGTGATCAAATCAGAAGTGCTGTCCTGATCTCATCAAAGCCAGGCTGCTTTATTGCAGGTGCTGATATCAACATGAT
AGCTGCTTGCAAGACCCCGCAAGAAGTAACATATTTATCGCAGGAAGGACAGAAAATGTTTGAGAAACTTGAGAAGTCCC
CAAAACCTATTGTGGCTGCCATCAGTGGATCCTGCTTGGGAGGAGGACTTGAGCTTGCCATTTCATGCCAATACAGAATA
GCAACAAAAGATAGAAAAACAGTATTAGGTACCCCTGAAGTTCTGCTGGGGATATTACCAGGAGCAGGAGGTACACAAAG
GCTTCCCAAAATGGTGGGTATGCCTGCTGCTTTTGACATGATGCTGACTGGTAGAAATATTCGTGCAGACAGAGCAAAGA
AAATGGGACTAGTTGACCAATTGGTGGAACCCTTGGGACCAGGAGTAAAACCTCCAGAGGAACGGACAATTGAATACCTA
GAAGAAGTTGCAGTGACTTTTGCCAAAGAACTGGCTGATAAAAAGATTTCTCCCAAGAGAGACAAGGGATTGATGGAAAA
ACTGACGTCGTTTGCGATGACTATTCCATTTGTCAGGCAACAAATTTACAAAAAGGTGGAAGAAAAAGTACGAAAGCAGA
CCAAAGGCCTTTATCCTGCACCACTGAAAATAATTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCAATTTGGAGACCTTGCAATGACCAAAGAATCAAAGGCCTTGGTGGGACTTTACCATGGTCAGGT
CCTGTGCAAGAAGAATAAATTTGGAGCACCTCAGAAGGATGTTAAGCATCTAGCTATTCTTGGTGCAGGGCTGATGGGAG
CCGGCATTGCCCAAGTCTCCGTGGATAAAGGGCTAAAGACTATACTTAAAGATGCTACAGTTGCCGGGCTAGGCAGAGGA
CAGCAACAAGTGTACAAAGGATTGAATGATAAAGTGAAGAAGAAAGCTCTAACATCATTTGAAAGGGACTCCATTTTCAG
CAACTTGACTGGGCAGCTCGATTACCAGGGTTTTGAAAAGGCAGACATGGTGATTGAAGCTGTGTTTGAGGACCTTAGCC
TCAAGCACAGAGTGCTAAAGGAAGTCGAAGTGTTGATTCCAGATCACTGTGTCTTTGCCAGTAACACATCTGCTCTCCCA
ATCAGAGAAATTGCTGCTGTCAGCAAAAGACCTGAGAAGGTGATTGGCATGCACTACTTCTCTCCTGTGGACAAGATGCA
GCTGCTGGAGATTATCACAACTGAAAAGACATCTAAGGACACAACCGCTTCTGCTGTAGCAGTTGGTCTCAAGCAGGGGA
AGGTCATCATTGTGGTTAAGGATGGACCTGGCTTCTACACCACCAGGTGCCTTGCCCCCATGATGTCTGAAGTCATCCGG
ATTCTCCAGGAAGGAGTCGACCCCAAGAAACTGGATTCCCTGACCACAAGCTTTGGGTTTCCTGTGGGTGCTGCAACACT
GGTGGATGAAGTTGGTGTGGATGTAGCTAAACATGTAGCCGAAGATCTCGGCAAAGCCTTTGGGGAGCGGTTTGGAGGTG
GAAGCATAGAACTGGTGCAGCAGATGGTATCCAAGGGCTTCCTGGGTCGCAAGTCTGGGAAGGGCTTTTACGTCTACCAG
GAGGGTGTGAAGAATAAGAATTTGAATTCTGACATGGATAGTATTTTGGCAAGTCTGAGGTTGACTCCTAAGTCTGATGT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCCTTCCGCTTT
GCGGATCTGTACGGTGCTCAGAAGATTGTGGACCGGCTCAGGAAGTACGAGGCTTACGGGAAACAGTTCACCCCATGCCA
GCTGCTGATCGACCACGCTAACAACCCTAACAAGAAGTTTTACCAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 149 .55 RPM
SRP012922_cerebellum 65 .85 RPM
SRP012922_heart 285 .86 RPM
SRP012922_kidney 163 .73 RPM
SRP012922_liver 161 .77 RPM
SRP012922_lung 74 .68 RPM
SRP012922_quadricep_muscle 412 .11 RPM
SRP012922_spleen 97 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000084754 ortholog_one2one 1 retrogene
retro_hsap_958,
Gorilla gorilla ENSGGOG00000004918 ortholog_one2one 1 retrogene
retro_ggor_772,
Macaca mulatta ENSMMUG00000004380 ortholog_one2one 2 retrogenes
retro_mmul_1987, retro_mmul_787,
Mustela putorius furo ENSMPUG00000008546 ortholog_one2one 1 retrogene
retro_mputfur_705,
Nomascus leucogenys ENSNLEG00000001616 ortholog_one2one 2 retrogenes
retro_nleu_1588, retro_nleu_772,
Pongo abelii ENSPPYG00000012583 ortholog_one2one 2 retrogenes
retro_pabe_2576, retro_pabe_817,
Pan troglodytes ENSPTRG00000011732 ortholog_one2one 2 retrogenes
retro_ptro_2109, retro_ptro_664,
Ictidomys tridecemlineatus ENSSTOG00000001593 ortholog_one2one 1 retrogene
retro_itri_681,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1863 95.55 64.83
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Download FASTA sequences of all ENSDNOG00000006972 retrocopies