Parental gene:

HADHA, ENSSTOG00000001593

Aliases:None
Description:hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit [Source:HGNC Symbol;Acc:4801]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393303.1:6182996..6224258(+)


>ENSSTOG00000001593
GGACCAGGAATAAAACCTCCACAGGAACGGACAATTGAATACCTAGAAGAAGTTGCAATTACTTTTGCCAATGGACTAGT
TGATAAGAAGATTTCTCCTAAGAGAAACAAGGGATTGATGGAAAAACTGACAGCATACGCCATGACTATTCCATTTGTTA
GACGACAGATCTACAAAACTGTGGAAGAAAAAGTGCGAAAGCAGACCAAAGGCCTTTATCCTGCCCCTCTGAAAATAATT
GATGTTGTAAAAACTGGACTTGAGCAAGGGAGTGAAGCTGGTTATCTTGCTGAATCACAGAAATTTGGAGAGCTGGCATT
GACCAAAGAATCAAAAGCCTTGGTGGGACTATATCATGGCCAAGTCCTGTGCAAGAAAAATAAATTTGGAGCCCCACAGA
AGGATGTTAAGCATTTAGGTATTCTTGGTGCAGGGCTTATGGGAGCTGGCATCGCCCAAGTCTCCGTGGACAAGGGGCTG
AAGACCCTTCTTAAAGACACTACGGTAGCTGGACTGGGACGGGGACAGCAACAAGTGTTCAAAGGATTAAACGACAAAGT
GAAGAAGAAATCTCTAACATCATTTGAAAGGGATTCCATCTTCAGCAACTTGATTGGGCAACTTGATTACCAGGGTTTTG
AAAAGGTCGACATGGTGATTGAAGCTGTTTTTGAGGACCTCAGTGTTAAGCACAAAGTACTAAAGGAAGTAGAAGCAGTG
ATTCCAGATCACTGTATCTTTGCCAGTAACACATCTGCTCTCCCAATCAATGAAATTGCTGCTGTCAGCAAAAGACCTGA
AAAGGTGATTGGTATGCACTACTTTTCTCCTGTGGACAAGATGCAGCTACTAGAGATCATCACAACAGAGAAAACATCCA
AGGACACAACTGCTTCTGCTGTAGCAGTTGGTCTCAAGCAAGGGAAGGTCATCATTGTGGTCAAGGATGGACCTGGCTTC
TACACCACCAGGTGTCTTGCACCCATGATGTCTGAAGTCATACGAATCCTCCAGGAAGGAGTTGACCCTAAGAAGCTGGA
TTCCCTGACCACAGGCTTTGGCTTTCCTGTGGGTGCTGCTACCCTGGCAGATGAAGTTGGTGTGGATGTAGCAAAACATG
TGGCAGAAGATCTGGGCAAAGCCTTTGGGGAGCGGTTTGGAGGTGGAAGCCCAGAGCTGCTGAACCAGATGGTGTCCAAG
GGCTTCCTGGGTCGCAAATCTGGGAAAGGCTTTTACATTTATCAGGAGGGTTCGAAGAATAAGAGTTTGAATTCTGACAT
GGATACTATTTTTGCAAGTCTGAGGCTTCCTGCTAAGCCTGAGGTCTCCTCTGATGAAGACATCCAGTACCGTGTGGTGA
CAAGATTTGTGAATGAAGCAGTGCTGTGCCTACAGGACGGGATCTTGGCCACACCTGCAGAGGGAGACATCGGAGCAGTC
TTTGGCCTTGGCTTCCCCCCTTGTCTCGGAGGTCCCTTCCGTTTTGTGGATCTATATGGTGCTCAGAAGATAGTGGACCG
GCTCCGGAAGTATGAAGCTGCCTATGGAAAACAGTTCACCCCATGCCAGCTGCTCATTGACCACGCCAACAGTCCCAGTA
AGAAGTTCTACCAGTGA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000006972 ortholog_one2one 1 retrogene
retro_dnov_1863,
Homo sapiens ENSG00000084754 ortholog_one2one 1 retrogene
retro_hsap_958,
Gorilla gorilla ENSGGOG00000004918 ortholog_one2one 1 retrogene
retro_ggor_772,
Macaca mulatta ENSMMUG00000004380 ortholog_one2one 2 retrogenes
retro_mmul_1987, retro_mmul_787,
Mustela putorius furo ENSMPUG00000008546 ortholog_one2one 1 retrogene
retro_mputfur_705,
Nomascus leucogenys ENSNLEG00000001616 ortholog_one2one 2 retrogenes
retro_nleu_1588, retro_nleu_772,
Pongo abelii ENSPPYG00000012583 ortholog_one2one 2 retrogenes
retro_pabe_2576, retro_pabe_817,
Pan troglodytes ENSPTRG00000011732 ortholog_one2one 2 retrogenes
retro_ptro_2109, retro_ptro_664,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_681 66.52 84.96
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Download FASTA sequences of all ENSSTOG00000001593 retrocopies