Parental gene:

Rpl5, ENSDORG00000005674

Aliases:None
Description:ribosomal protein L5 [Source:MGI Symbol;Acc:MGI:102854]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_2314:1086..7820(+)


>ENSDORG00000005674
ATTGCTTATGCGCGCATAGAAGGAGACATGATCGTCTGTGCGGCATATGCACATGAACTACCCAAGTATGGTGTGAAGGT
TGGCCTAACCAATTATGCGGCTGCCTATTGTACTGGCCTGCTGCTGGCCCGCAGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTAGATGCAGGACTTGCCAGAACTACCACTGGCAATAAAGTCTTTGGTGCCCTAAAGGGAGCTGTGGATGGAGG
CTTGTCTATCCCTCACAGTACCAAACGATTCCCTGGTTATGATTCTGAGAGCAAGGAGTTCAATGCAGAAGTACATCGGA
AGCACATCATGGGTCAGAATGTCGCAGATTATATGCGTTACCTAATGGAAGAAGATGAAGATTCTTACAAGAAGCAGTTT
TCTCAGTACATAAAGAACAACGTAACTCCAGACATGATGGAGGAGATGTACAAGAAGGCTCACGCTGCTATACGAGAGAA
TCCAGTCTATGTGAAGAAGCCCAAGAGAGAAGTGAAGAAGAAGAGGTGGAATCGTCCTAAAATGTCCCTTGCTCAGAAGA
AAGATCGGGTAGCTCAAAAGAAGGCAAGCTTCCTCAGAGCTCAGGAGCGGGCTGCTGAGAGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009878 ortholog_one2one 5 retrogenes
retro_amel_1200, retro_amel_137, retro_amel_139, retro_amel_1439, retro_amel_1669,
Bos taurus ENSBTAG00000002026 ortholog_one2many 2 retrogenes
retro_btau_120, retro_btau_67,
Equus caballus ENSECAG00000021065 ortholog_one2one 1 retrogene
retro_ecab_654,
Macropus eugenii ENSMEUG00000006361 ortholog_one2one 3 retrogenes
retro_meug_1168, retro_meug_1537, retro_meug_2146,
Monodelphis domestica ENSMODG00000011635 ortholog_one2one 1 retrogene
retro_mdom_748,
Mustela putorius furo ENSMPUG00000004150 ortholog_one2one 6 retrogenes
retro_mputfur_213, retro_mputfur_449, retro_mputfur_451, retro_mputfur_597, retro_mputfur_721, retro_mputfur_833,
Ornithorhynchus anatinus ENSOANG00000004669 ortholog_one2many 1 retrogene
retro_oana_97,
Oryctolagus cuniculus ENSOCUG00000010089 possible_ortholog 2 retrogenes
retro_ocun_265, retro_ocun_54,
Petromyzon marinus ENSPMAG00000002040 ortholog_one2one 1 retrogene
retro_pmar_23,
Pteropus vampyrus ENSPVAG00000015117 ortholog_one2one 4 retrogenes
retro_pvam_1427, retro_pvam_355, retro_pvam_505, retro_pvam_527,
Rattus norvegicus ENSRNOG00000023529 possible_ortholog 6 retrogenes
retro_rnor_113, retro_rnor_2246, retro_rnor_2418, retro_rnor_2498, retro_rnor_2802, retro_rnor_2922,
Sarcophilus harrisii ENSSHAG00000006417 ortholog_one2one 1 retrogene
retro_shar_202,
Sus scrofa ENSSSCG00000006899 ortholog_one2one 2 retrogenes
retro_sscr_149, retro_sscr_219,
Tupaia belangeri ENSTBEG00000010560 ortholog_one2one 5 retrogenes
retro_tbel_101, retro_tbel_1054, retro_tbel_1518, retro_tbel_3006, retro_tbel_3530,
Tursiops truncatus ENSTTRG00000013097 ortholog_one2one 5 retrogenes
retro_ttru_1446, retro_ttru_1548, retro_ttru_1796, retro_ttru_645, retro_ttru_979,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_226 87.23 59.83
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2. retro_dord_670 96.71 64.96
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Download FASTA sequences of all ENSDORG00000005674 retrocopies