Parental gene:

FAM192A, ENSECAG00000009324

Aliases:None
Description:family with sequence similarity 192, member A [Source:HGNC Symbol;Acc:29856]
Organism:Horse (Equus caballus)
Coordinates:3:9451885..9482216(-)


>ENSECAG00000009324
ATGGATGGAGGGGATGATGGTAACCTTGTTATCAAAAAGAGGTTTGTGTCCGAGGCAGAACTAGATGAGCGGCGCAAAAG
GAGGCAAGAGGAATGGGAGAAAGTTCGGAAACCTGAAGATCCGGAAGAGTGTCCAGAGGAGGCTTATGACCCTCGGTCTC
TGTATGAAAGGCTCCAGGAGCAGAAAGACAGGAAGCAGCAGGAGTACGAGGAGCAGTTCAAATTCAAGAACATGGTAAGA
GGCTTAGACGAAGATGAGACCAACTTCCTTGACGAGGTTTCTCGGCAGCAGGAACTAATAGAAAAGCAACGAAGAGAAGA
AGAACTGAAGGAACTGAAGGAATACAGAATATCCTTTAACCACGTTGGAATTTCTTCAGAAAACAAGAAGGAAGTGGAGA
AGAAAGTGGCTGTGAAACCCATGGAAACCAGGAACAAGTTCTCCCAGGCTAAGCTGTTGGCAGGAGCTGTGAAGCATAAG
AGCTCAGAGAGTGGCAACAGTGTGAAAAGACTGAAATCGGATCCGGACCCAGATGACAAGAATCAAGAAGCCCTGCCCTG
CGTGTCTCTTGGCAGCGCATCCCTGAGCGCTCCGTCCATCCACTGCCCGTCCGCCGCCGTCTGCATCGGCATCCTCCCGG
GCCTGGGCGCCTACTCGGGGAGCAGTGACTCTGAGTCCAGCTCCGACAGCGAGGGCACCATCAACGCCACCGGCAAGATC
GTCTCCTCCATCTTCCGAACCAACACCTTCCTCGAGGCCCCCTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 19 .44 RPM
SRP021940_embryo 29 .00 RPM
SRP021940_cerebellum 40 .25 RPM
SRP021940_testis 81 .21 RPM
SRP021940_placental_villous 18 .38 RPM
SRP021940_articular_cartilage 14 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002242 ortholog_one2one 1 retrogene
retro_btau_1133,
Cavia porcellus ENSCPOG00000001392 ortholog_one2many 1 retrogene
retro_cpor_122,
Echinops telfairi ENSETEG00000014379 ortholog_one2one 1 retrogene
retro_etel_930,
Homo sapiens ENSG00000172775 ortholog_one2one 1 retrogene
retro_hsap_2994,
Gorilla gorilla ENSGGOG00000003938 ortholog_one2one 1 retrogene
retro_ggor_2074,
Macaca mulatta ENSMMUG00000013492 ortholog_one2many 1 retrogene
retro_mmul_189,
Mus musculus ENSMUSG00000031774 ortholog_one2one 1 retrogene
retro_mmus_428,
Nomascus leucogenys ENSNLEG00000002716 ortholog_one2one 1 retrogene
retro_nleu_745,
Ochotona princeps ENSOPRG00000006909 ortholog_one2one 2 retrogenes
retro_opri_175, retro_opri_579,
Pongo abelii ENSPPYG00000007382 ortholog_one2one 1 retrogene
retro_pabe_2480,
Pan troglodytes ENSPTRG00000008148 ortholog_one2one 1 retrogene
retro_ptro_2025,
Tarsius syrichta ENSTSYG00000013300 ortholog_one2one 1 retrogene
retro_tsyr_884,
Tursiops truncatus ENSTTRG00000012791 ortholog_one2one 1 retrogene
retro_ttru_1884,
Vicugna pacos ENSVPAG00000005973 ortholog_one2one 1 retrogene
retro_vpac_321,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_710 70.44 61.81
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Download FASTA sequences of all ENSECAG00000009324 retrocopies