Parental gene:

FAM192A, ENSG00000172775

Aliases:FAM192A, C16orf94, CDA018, NIP30
Description:family with sequence similarity 192, member A [Source:HGNC Symbol;Acc:29856]
Organism:Human (Homo sapiens)
Coordinates:16:57186377..57220028(-)


>ENSG00000172775
ATGGATGGAGGGGATGATGGTAACCTTATTATCAAAAAGAGGTTTGTGTCTGAGGCAGAACTAGATGAACGGCGCAAAAG
GAGGCAAGAAGAATGGGAGAAAGTTCGAAAACCTGAAGATCCAGAAGAATGTCCAGAGGAGGTTTATGACCCTCGATCTC
TATATGAAAGGCTACAGGAACAGAAGGACAGGAAGCAGCAGGAGTACGAGGAACAGTTCAAATTCAAAAACATGGTAAGA
GGCTTAGATGAAGATGAGACCAACTTCCTTGATGAGGTTTCTCGACAGCAGGAACTAATAGAAAAGCAACGAAGAGAAGA
AGAACTGAAAGAACTGAAGGAATACAGAAATAACCTCAAGAAGGTTGGAATTTCTCAAGAGAACAAGAAGGAAGTGGAAA
AGAAACTGACTGTGAAGCCTATAGAAACCAAGAACAAGTTCTCCCAGGCGAAGCTGTTGGCAGGAGCTGTGAAGCATAAG
AGCTCAGAGAGTGGCAACAGTGTGAAAAGACTGAAACCGGACCCTGAGCCAGATGACAAGAATCAAGAGCCCTCATCCTG
CAAGTCTCTCGGAAACACCTCCCTGAGTGGCCCCTCCATCCACTGCCCCTCTGCTGCAGTATGTATCGGCATCCTCCCAG
GCCTGGGTGCCTACTCTGGGAGCAGCGACTCCGAGTCCAGCTCAGACAGCGAAGGCACCATCAATGCCACCGGAAAGATT
GTCTCCTCCATCTTCCGAACCAACACCTTCCTCGAGGCCCCCTAG

Library Parental gene expression (RPM)
bodymap2_liver 24 .31 RPM
bodymap2_lung 34 .44 RPM
bodymap2_breast 43 .70 RPM
bodymap2_adipose 48 .90 RPM
bodymap2_adrenal 73 .63 RPM
bodymap2_skeletal_muscle 33 .36 RPM
bodymap2_thyroid 60 .02 RPM
bodymap2_prostate 55 .08 RPM
bodymap2_colon 40 .91 RPM
bodymap2_testis 81 .69 RPM
bodymap2_brain 96 .71 RPM
bodymap2_heart 33 .06 RPM
bodymap2_white_blood_cells 52 .65 RPM
bodymap2_lymph_node 59 .10 RPM
bodymap2_ovary 54 .63 RPM
bodymap2_kidney 56 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002242 ortholog_one2one 1 retrogene
retro_btau_1133,
Cavia porcellus ENSCPOG00000001392 ortholog_one2many 1 retrogene
retro_cpor_122,
Equus caballus ENSECAG00000009324 ortholog_one2one 1 retrogene
retro_ecab_710,
Echinops telfairi ENSETEG00000014379 ortholog_one2one 1 retrogene
retro_etel_930,
Gorilla gorilla ENSGGOG00000003938 ortholog_one2one 1 retrogene
retro_ggor_2074,
Macaca mulatta ENSMMUG00000013492 ortholog_one2many 1 retrogene
retro_mmul_189,
Mus musculus ENSMUSG00000031774 ortholog_one2one 1 retrogene
retro_mmus_428,
Nomascus leucogenys ENSNLEG00000002716 ortholog_one2one 1 retrogene
retro_nleu_745,
Ochotona princeps ENSOPRG00000006909 ortholog_one2one 2 retrogenes
retro_opri_175, retro_opri_579,
Pongo abelii ENSPPYG00000007382 ortholog_one2one 1 retrogene
retro_pabe_2480,
Pan troglodytes ENSPTRG00000008148 ortholog_one2one 1 retrogene
retro_ptro_2025,
Tarsius syrichta ENSTSYG00000013300 ortholog_one2one 1 retrogene
retro_tsyr_884,
Tursiops truncatus ENSTTRG00000012791 ortholog_one2one 1 retrogene
retro_ttru_1884,
Vicugna pacos ENSVPAG00000005973 ortholog_one2one 1 retrogene
retro_vpac_321,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2994 92.91 100.00
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Download FASTA sequences of all ENSG00000172775 retrocopies