Parental gene:

BAG1, ENSECAG00000017942

Aliases:None
Description:BCL2-associated athanogene [Source:HGNC Symbol;Acc:937]
Organism:Horse (Equus caballus)
Coordinates:23:49691705..49700818(-)


>ENSECAG00000017942
CGGGGCGAAGAGGTGGCCCAGAGCGAAGAGGTGACCCCGAGCGAAGAGGAGGCCCGGAGCGAGGAAATGGCGGCAGCCGG
GCTCAGCGTGACCGTCACCCACAGCAATGAGAAGCATGACCTACATGTTACCCCACAAGAGGGCTGTAGCGAACCAATTG
TTCAAGACCTGGCCCAGGTTGTGGAAGAGGCCACAGGGGTCCCGCTGCCTTTTCAAAAACTCATATTTAAGGGAAAATCT
CTGAAAGAAATGGAGACGCCGTTGTCAGCACTTGGAATACAAAATGGTTGCCGGGTTATGTTAATTGGGAAAAAGAACAG
TCCAGAGGAAGAGGTTGAACTAAAGAAGTTGAAAGGTCTGGAGAGGTCTGTGGAGAAGATAGCTGACCAGCTGGAAGAGT
TGAACAAGGAGCTTACCGGAATCCAGCAGGGTTTTCTGGCTAAGGATTTGCAAGCTGAAGCTCTCTGCAGACTTGATAGG
AAAGTAAAAGCCACAATTGAGCAGTTTATGAAGATCTTGGAGGAGATTGACACACTGATTCTGCCAGAAAATTTCAAAGA
CAGTAGACTGAAAAGGAAGGGCCTAGTGAAGAGGGTTCAGGCATTCCTCGCTGAGTGTGACACGGTGGAGCAGAACATCT
GCCAGGAGACGGAGCGGCTGCAGTCCACAAACTTGGCCCTGGCCGAGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 52 .76 RPM
SRP021940_embryo 28 .79 RPM
SRP021940_cerebellum 47 .41 RPM
SRP021940_testis 129 .55 RPM
SRP021940_placental_villous 26 .36 RPM
SRP021940_articular_cartilage 39 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017845 ortholog_one2one 1 retrogene
retro_btau_901,
Choloepus hoffmanni ENSCHOG00000012656 ortholog_one2one 1 retrogene
retro_chof_2328,
Callithrix jacchus ENSCJAG00000008074 ortholog_one2one 1 retrogene
retro_cjac_4052,
Homo sapiens ENSG00000107262 ortholog_one2one 1 retrogene
retro_hsap_4673,
Gorilla gorilla ENSGGOG00000016534 ortholog_one2one 1 retrogene
retro_ggor_2899,
Macaca mulatta ENSMMUG00000020148 ortholog_one2one 1 retrogene
retro_mmul_2487,
Nomascus leucogenys ENSNLEG00000005204 ortholog_one2one 1 retrogene
retro_nleu_2165,
Oryctolagus cuniculus ENSOCUG00000008945 ortholog_one2many 1 retrogene
retro_ocun_481,
Pongo abelii ENSPPYG00000019138 ortholog_one2one 1 retrogene
retro_pabe_3630,
Pan troglodytes ENSPTRG00000020856 ortholog_one2one 1 retrogene
retro_ptro_3105,
Tursiops truncatus ENSTTRG00000010573 ortholog_one2one 2 retrogenes
retro_ttru_252, retro_ttru_946,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_267 55.35 68.12
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Download FASTA sequences of all ENSECAG00000017942 retrocopies