Parental gene:

YRDC, ENSECAG00000022522

Aliases:None
Description:yrdC domain containing (E. coli) [Source:HGNC Symbol;Acc:28905]
Organism:Horse (Equus caballus)
Coordinates:2:19875527..19878531(+)


>ENSECAG00000022522
GCGGTGTACCGCCTCAAGAGCCGCAGCGAGCCAGCCTGTGCCGTATGCCTGGGCCGCGTGGCCGACGTCTACAGGTACTG
CCATGTGAGAGTACCCGAGGGGCTCCTGAAAGACCTGTTACCAGGACCGGTGACCCTGGTGATGGAACGCTCAGAGGAGC
TCAACAAGGACCTGAACCCCTTCACTCCTCTCGTGGGCATCCGGATTCCTGACCATGCCTTCATGCAGGACTTGGCCCAG
GTGTTTGGGGGACCACTTGCTCTCACCAGTGCCAATCTCAGCTCCCAGGCCAGTTCTCTGAATGTCGAGGAGTTCCAAGA
CCTCTGGCCTCAACTGTCCCTGGTCGTTGATGGGGGACCGATTGGGGATGGCCAGAGCCCTGAGTGTCGCCTCGGCTCAA
CTGTGGTTGACTTGTCTGTGCCTGGAAAGTTTGGCATCATTCGTCCAGGCTGTGCCCTGGAAAGTACTACAGCCATCCTC
CAACAGAAGTACGGGTTGCTCCCTTCACACGGATCCTGCTTGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 4 .28 RPM
SRP021940_embryo 4 .50 RPM
SRP021940_cerebellum 10 .91 RPM
SRP021940_testis 9 .40 RPM
SRP021940_placental_villous 4 .86 RPM
SRP021940_articular_cartilage 3 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001173 ortholog_one2one 1 retrogene
retro_amel_350,
Dasypus novemcinctus ENSDNOG00000009111 ortholog_one2one 2 retrogenes
retro_dnov_1774, retro_dnov_2232,
Felis catus ENSFCAG00000011018 ortholog_one2one 1 retrogene
retro_fcat_375,
Homo sapiens ENSG00000196449 ortholog_one2one 2 retrogenes
retro_hsap_4199, retro_hsap_4289,
Gorilla gorilla ENSGGOG00000007619 ortholog_one2one 1 retrogene
retro_ggor_2866,
Macropus eugenii ENSMEUG00000005068 ortholog_one2one 1 retrogene
retro_meug_452,
Microcebus murinus ENSMICG00000011953 ortholog_one2one 1 retrogene
retro_mmur_188,
Myotis lucifugus ENSMLUG00000000955 ortholog_one2many 1 retrogene
retro_mluc_367,
Macaca mulatta ENSMMUG00000005372 ortholog_one2one 2 retrogenes
retro_mmul_1206, retro_mmul_1662,
Nomascus leucogenys ENSNLEG00000011665 ortholog_one2one 2 retrogenes
retro_nleu_1045, retro_nleu_1046,
Otolemur garnettii ENSOGAG00000030474 ortholog_one2one 2 retrogenes
retro_ogar_1107, retro_ogar_2342,
Pongo abelii ENSPPYG00000001523 ortholog_one2one 1 retrogene
retro_pabe_3495,
Pan troglodytes ENSPTRG00000000557 ortholog_one2one 4 retrogenes
retro_ptro_2850, retro_ptro_2906, retro_ptro_2907, retro_ptro_2999,
Tupaia belangeri ENSTBEG00000008863 ortholog_one2one 1 retrogene
retro_tbel_1817,
Tarsius syrichta ENSTSYG00000005555 ortholog_one2one 3 retrogenes
retro_tsyr_1108, retro_tsyr_1420, retro_tsyr_874,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_534 83.91 99.43
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Download FASTA sequences of all ENSECAG00000022522 retrocopies