Parental gene:

YRDC, ENSFCAG00000011018

Aliases:None
Description:yrdC domain containing (E. coli) [Source:HGNC Symbol;Acc:28905]
Organism:Cat (Felis catus)
Coordinates:C1:28292499..28295751(-)


>ENSFCAG00000011018
GCCGCAGCATCTCCTCGCAGGCGGCGATGGTGTCCAGGAGCTGCCGCTGCCGCTGCTCCACCGCGTCCAGCAGCTGCTGC
TGTTGTAGCCTCAGAGACTAGAGGCATGTGGGCCCCAAACCGGGAGTGCTCCTCTGGAGCCCAGCGTCTCAAACTCTCAG
GGAGGACCAGCAGCGACCCTTCATTCTTGGATGGATCTGTGTCCCCTCTGTTTTCCAGGTATTGCCATGTGAGAGTACCC
GAGGGGCTCCTGAAAGACTTATTACCAGGACCAGTGACCCTGGTGTTGGAACGCTCTGAGGAGCTTAATAAGGATCTGAA
CCCCTTTACTCGTCTCGTAGGCATCCGGATTCCTGACCATGCCTTCATACAGGATTTGGCTCAGGTGTTTGGGGGGCCAC
TTGCTCTCACCAGTGCCAACCTCAGCTCCCAGGCCAGTTCTCTGAACGTGGAGGAGTTCCAGGACCTCTGGCCTCAGCTG
TCCCTGATCATTGATGGGGGACCAATCGGGGATGGCCAGAGCTCTGAGTATCGCCTGGGCTCAACTGTGGTTGACTTATC
TGTACCTGGAAAGTTTGGCATCATCCGCCCAGGCTGTGCCCTGGAGAGAACTACAGCCATCCTCCAGCAGAAGTACGGGC
TGCTCCCCTCACACGGATCCTGCTCGTGA

Library Parental gene expression (RPM)
SRP017611_liver 2 .53 RPM
SRP017611_kidney 5 .46 RPM
SRP017611_brain 8 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001173 ortholog_one2one 1 retrogene
retro_amel_350,
Dasypus novemcinctus ENSDNOG00000009111 ortholog_one2one 2 retrogenes
retro_dnov_1774, retro_dnov_2232,
Equus caballus ENSECAG00000022522 ortholog_one2one 1 retrogene
retro_ecab_534,
Homo sapiens ENSG00000196449 ortholog_one2one 2 retrogenes
retro_hsap_4199, retro_hsap_4289,
Gorilla gorilla ENSGGOG00000007619 ortholog_one2one 1 retrogene
retro_ggor_2866,
Macropus eugenii ENSMEUG00000005068 ortholog_one2one 1 retrogene
retro_meug_452,
Microcebus murinus ENSMICG00000011953 ortholog_one2one 1 retrogene
retro_mmur_188,
Myotis lucifugus ENSMLUG00000000955 ortholog_one2many 1 retrogene
retro_mluc_367,
Macaca mulatta ENSMMUG00000005372 ortholog_one2one 2 retrogenes
retro_mmul_1206, retro_mmul_1662,
Nomascus leucogenys ENSNLEG00000011665 ortholog_one2one 2 retrogenes
retro_nleu_1045, retro_nleu_1046,
Otolemur garnettii ENSOGAG00000030474 ortholog_one2one 2 retrogenes
retro_ogar_1107, retro_ogar_2342,
Pongo abelii ENSPPYG00000001523 ortholog_one2one 1 retrogene
retro_pabe_3495,
Pan troglodytes ENSPTRG00000000557 ortholog_one2one 4 retrogenes
retro_ptro_2850, retro_ptro_2906, retro_ptro_2907, retro_ptro_2999,
Tupaia belangeri ENSTBEG00000008863 ortholog_one2one 1 retrogene
retro_tbel_1817,
Tarsius syrichta ENSTSYG00000005555 ortholog_one2one 3 retrogenes
retro_tsyr_1108, retro_tsyr_1420, retro_tsyr_874,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_375 63.22 77.03
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Download FASTA sequences of all ENSFCAG00000011018 retrocopies