Parental gene:

NUS1, ENSEEUG00000008948

Aliases:None
Description:nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21042]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5391:32435..84403(+)


>ENSEEUG00000008948
ATGACGGGGCTGTATGAGCTGGTGTGGCGGGTGCTGCATGCTCTGCCCTGTCTGCACCGCACGCTCACCTCCTGGATCCG
CGTTCGGCTGGGCACCTGGAACTGGATCTGGAGGCGCTGCTGCAACGCCGCCTCTGCCGCGGTCCTAGCGCCCCTCGTCT
TCACGCTCCGCAAGTCCCTGGCTGCGGGCAGGAACCGCCGGCACCACCGGCAGCCGCGCGGCGGACTCGGCCGGGCCGCC
GCCCACCCCCGGCTGCGCTGGCGCGCGGACGGCCGTTCCCTGGAGAAGCTGCCTTTGCACATGGGCCTGGTGATCACCGA
GGAGGAGCCGGAGCCCAGCTTCTCGGACATCGCCAGCCTCGTGGTTTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTTAAGAGAAATAATTCCAGGTTGATGGATGAAATTTTAAAGCAGCAGCACGAACTTCTG
GGCTTAGATTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAAATTGTCGCTCGGC
AGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTGAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGC
AGCAAAAGAGGTCCACAGATTTGGATGTAGATTTGTTAGACAGTTTACTTAGTACAAATGGTTTCCCTGATCCTGATTTG
GTCTTGAAGTTTGGTCCCGTGGACAGCACATTAGGCTTTCTTCCATGGCACATCAGATTGACTGAGATTATCTCTTTGCC
TTCCCACCTAAACATCAGCTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCATCTTGTGAACAGCGTCTGGGAAAGT
AG

Library Parental gene expression (RPM)
SRP017611_liver 4 .02 RPM
SRP017611_kidney 20 .07 RPM
SRP017611_brain 10 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001780 ortholog_one2one 1 retrogene
retro_dnov_1639,
Homo sapiens ENSG00000153989 ortholog_one2one 4 retrogenes
retro_hsap_1174, retro_hsap_1176, retro_hsap_1289, retro_hsap_4825,
Gorilla gorilla ENSGGOG00000022321 ortholog_one2one 4 retrogenes
retro_ggor_1012, retro_ggor_914, retro_ggor_915, retro_ggor_993,
Microcebus murinus ENSMICG00000007831 ortholog_one2one 1 retrogene
retro_mmur_423,
Nomascus leucogenys ENSNLEG00000013457 ortholog_one2one 1 retrogene
retro_nleu_2411,
Oryctolagus cuniculus ENSOCUG00000011553 ortholog_one2one 1 retrogene
retro_ocun_1713,
Pongo abelii ENSPPYG00000025886 ortholog_one2many 1 retrogene
retro_pabe_81,
Pan troglodytes ENSPTRG00000018547 ortholog_one2many 1 retrogene
retro_ptro_808,
Tarsius syrichta ENSTSYG00000003212 ortholog_one2one 1 retrogene
retro_tsyr_633,
Tursiops truncatus ENSTTRG00000007352 ortholog_one2one 2 retrogenes
retro_ttru_358, retro_ttru_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_443 80.99 94.88
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Download FASTA sequences of all ENSEEUG00000008948 retrocopies