Parental gene: | NUS1, ENSGGOG00000022321 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 6:117997796..118029570(+) |
>ENSGGOG00000022321
ATGACGGGGCTGTACGAGCTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGTCTGCACCGGACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGCCGCGCCGCCTCTGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGCCCCCGGCAGTCGGAAGGAACCGCCGTCACCACCGGCACCCGCGCGGGGGGTCGTGCCTGGCAGCC
GCACTCCACCGGATGCGCTGGCGCGCGGACGGTCGTTCCTTGGAGAAGCTGCCTGTGCATATGGGCCTGGTGATCACCGA
GGTGGAGCAGGAACCCAGCTTCTCGGACATCGCGAGCCTCGTGGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTG
GGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTGCCATTTGGC
AGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGA
AGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGGCAGTTTACTTAGTTCAAATGGTTGTCCTGATCCTGATTTA
GTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCC
TTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGT
AG
ATGACGGGGCTGTACGAGCTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGTCTGCACCGGACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGCCGCGCCGCCTCTGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGCCCCCGGCAGTCGGAAGGAACCGCCGTCACCACCGGCACCCGCGCGGGGGGTCGTGCCTGGCAGCC
GCACTCCACCGGATGCGCTGGCGCGCGGACGGTCGTTCCTTGGAGAAGCTGCCTGTGCATATGGGCCTGGTGATCACCGA
GGTGGAGCAGGAACCCAGCTTCTCGGACATCGCGAGCCTCGTGGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTG
GGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTGCCATTTGGC
AGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGA
AGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGGCAGTTTACTTAGTTCAAATGGTTGTCCTGATCCTGATTTA
GTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCC
TTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGT
AG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .89 RPM |
| SRP007412_cerebellum | 2 .36 RPM |
| SRP007412_heart | 1 .13 RPM |
| SRP007412_kidney | 6 .30 RPM |
| SRP007412_liver | 4 .09 RPM |
| SRP007412_testis | 8 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000001780 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000008948 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000153989 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000007831 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013457 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011553 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025886 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018547 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000003212 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007352 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_914 | 88.21 | 77.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_915 | 87.35 | 56.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_993 | 96.25 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_1012 | 85.43 | 51.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000022321 retrocopies