Parental gene:

NUS1, ENSPPYG00000025886

Aliases:None
Description:nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21042]
Organism:Orangutan (Pongo abelii)
Coordinates:6:119960730..119983636(+)


>ENSPPYG00000025886
ATGACGGGGCTGTACGAGCTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGTCTGCACCGCACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGCCGCGCCGCCTCTGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGCCCCCGGCAGTCGGCAGGAACCGCCGTCACCACCGGCACCCGCGCGGGGGGTCGTGCCTGGCAGCC
GCACACCACCGGATGCGCTGGCGCGCGGACGGCCGTTCCTTGGAGAAGCTGCCTGTGCATATGGGCCTGGTGATCACCGA
GGTGGAGCAGGAACCCAGCTTCTCGGACATCGCGAGCCTCGTGGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTG
GGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTGCCATTTGGC
AGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGA
AGCAAAAGAGACCCACAGATTTGGATGTAGATACATTAGGCAGTTTACTTAGTTCAAATGGTTGTCCTGATCCTGATTTA
GTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .31 RPM
SRP007412_cerebellum 2 .80 RPM
SRP007412_heart 2 .92 RPM
SRP007412_kidney 5 .87 RPM
SRP007412_liver 7 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001780 ortholog_one2many 1 retrogene
retro_dnov_1639,
Erinaceus europaeus ENSEEUG00000008948 ortholog_one2many 1 retrogene
retro_eeur_443,
Homo sapiens ENSG00000153989 ortholog_one2one 4 retrogenes
retro_hsap_1174, retro_hsap_1176, retro_hsap_1289, retro_hsap_4825,
Gorilla gorilla ENSGGOG00000022321 ortholog_one2one 4 retrogenes
retro_ggor_1012, retro_ggor_914, retro_ggor_915, retro_ggor_993,
Microcebus murinus ENSMICG00000007831 ortholog_one2many 1 retrogene
retro_mmur_423,
Nomascus leucogenys ENSNLEG00000013457 ortholog_one2many 1 retrogene
retro_nleu_2411,
Oryctolagus cuniculus ENSOCUG00000011553 ortholog_one2many 1 retrogene
retro_ocun_1713,
Pan troglodytes ENSPTRG00000018547 ortholog_one2many 1 retrogene
retro_ptro_808,
Tarsius syrichta ENSTSYG00000003212 ortholog_one2many 1 retrogene
retro_tsyr_633,
Tursiops truncatus ENSTTRG00000007352 ortholog_one2many 2 retrogenes
retro_ttru_358, retro_ttru_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_81 96.21 100.00
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Download FASTA sequences of all ENSPPYG00000025886 retrocopies