Parental gene: | SDAD1, ENSETEG00000004811 |
| Aliases: | None |
| Description: | SDA1 domain containing 1 [Source:HGNC Symbol;Acc:25537] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_8417:6661..26793(-) |
>ENSETEG00000004811
ATGTTTATGGCACAGATTGGACACTGCTACCCAGAACAGCTCAGTAGCTTTCCTCAGGAACTGAAAGATCTGCTCTCCTA
CAATCACACTGTCTTGGATTCTGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTACTGAGAAACAAGAATCTCATCA
ACCCATCGAGTTTGCTCGAGCTCTTCTTTGAACTTCTGCGCTGCCACGATAAGCTTCTGCGAAAGACTTTGTACACTCAC
ATTGTGACTGATATCAAGAACATCAATGCAAAACACAAGAACAATAAAGTGAATGTAGTGCTGCAAAACTTCATGTACAC
CATGCTAAGGGACAGCAGTGCAACGGCAGCTAAGATCTCCTTGGATGTGATGATTGAGCTCTACAGGAGAAACATCTGGA
ATGATGCCAAAACTGTCAACGTTATCACAACTGCATGCTTCTCTCCGGTCACCAAGATCCTGGTGGCTGCTCTGACATTC
TTCCTCAAAGATGAGCAGGAGAAGCAGGACAGCGACTCGGACTCGGAGGAAGGGCCAACCGCGAGAGACCTCGTGCAGTA
CGCCACGGGGAAGAAAAGCTCCAAGCACAAGAAGAAACTGGAGAAGGCCATGAAGGTGCTCAAGAAACAAAAGAAGAAGA
AGAAACCGGAGGTGTTTAACTTCTCAGCCATTCACTTGATTCATGATCCCCAAGATTTTGCTGAAAAACTACTGAAACAA
CTCGAGAGCTCCAAGGAGAGATTTGAAGTGAAGATGATGCTCATGAACCTTATCTCCAGATTGGTGGGAATTCATGAGCT
CTTCCTCTTTAACTTCTATCCCTTCGTTCAAAGGTTTCTGCAGCCCCACCAGAGAGAAGTCACAAAGATCCTTCTGTTTG
CTGCACAAGCCTCTCATCACCTGGTTCCCCCAGAGATCATTCAGTCATTGCTCATGACGGTGGCCAACAATTTTGTCACT
GACAAGAACTCTGGAGAAGTTATGACCGTAGGAATCAATGCCATCAAAGAGATAACAGCTCGATGTCCCCTAGCCATGAC
TGAAGAACTTCTCCAAGACCTGGCTCAGTATAAAACACACAAAGATAAGAATGTGATGATGTCTGCTAGAACTTTGATTC
AGCTCTTCCGAACACTGAATCCTCAGATGTTGCACAAGAAATTCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATGGGTGGGAAAGTGCCAGTCTCAGTGAGGAGGAGGACGATGATGGCGAAATGGTCGACGTGCCCC
ACTCTTCCGATGAAGAACAGCGAGAAGTTACGAAGAAGCTGGACAGCATGCCTATGGAGGAGCGGAAAGCCAAAGCTGCA
GCCATCAGCACGAGTCGCGTTTTAACGCAGGAAGACTTCCAGAAGATCCGCGTGGCCCAGATGAGGAAAGAGCTCAGTGC
TGCTCCCGGGAAGGCGGAAAAGAGGAAGTTCATAGAGATAGACAGCGACGAGGAGCCCAGGGGCGAGTTACTTTCCCTGC
GAGACATCGAGCGCCTTCATAAAAAGCCAAAGTCTGACAAGGAGACGAGACTGGCGACCGCAATGGCTGGGAAAACAGAC
CGAAAAGAATTTGTGAGGAAGAAAACCAAAATGAATCCATATTCAAGTTCCACAAATAAAGAGAAGAAGAAACAGAAGAA
CTATATGATGATGCGGTATAGCCAGAATGTCCGGACAAAAAATAAGCGCTCCTTCAGAGAAAAGCAGCTGGCGCTACGAG
ATGCACTTAAAAAGAGAAAGCGAATGAAGTAA
ATGTTTATGGCACAGATTGGACACTGCTACCCAGAACAGCTCAGTAGCTTTCCTCAGGAACTGAAAGATCTGCTCTCCTA
CAATCACACTGTCTTGGATTCTGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTACTGAGAAACAAGAATCTCATCA
ACCCATCGAGTTTGCTCGAGCTCTTCTTTGAACTTCTGCGCTGCCACGATAAGCTTCTGCGAAAGACTTTGTACACTCAC
ATTGTGACTGATATCAAGAACATCAATGCAAAACACAAGAACAATAAAGTGAATGTAGTGCTGCAAAACTTCATGTACAC
CATGCTAAGGGACAGCAGTGCAACGGCAGCTAAGATCTCCTTGGATGTGATGATTGAGCTCTACAGGAGAAACATCTGGA
ATGATGCCAAAACTGTCAACGTTATCACAACTGCATGCTTCTCTCCGGTCACCAAGATCCTGGTGGCTGCTCTGACATTC
TTCCTCAAAGATGAGCAGGAGAAGCAGGACAGCGACTCGGACTCGGAGGAAGGGCCAACCGCGAGAGACCTCGTGCAGTA
CGCCACGGGGAAGAAAAGCTCCAAGCACAAGAAGAAACTGGAGAAGGCCATGAAGGTGCTCAAGAAACAAAAGAAGAAGA
AGAAACCGGAGGTGTTTAACTTCTCAGCCATTCACTTGATTCATGATCCCCAAGATTTTGCTGAAAAACTACTGAAACAA
CTCGAGAGCTCCAAGGAGAGATTTGAAGTGAAGATGATGCTCATGAACCTTATCTCCAGATTGGTGGGAATTCATGAGCT
CTTCCTCTTTAACTTCTATCCCTTCGTTCAAAGGTTTCTGCAGCCCCACCAGAGAGAAGTCACAAAGATCCTTCTGTTTG
CTGCACAAGCCTCTCATCACCTGGTTCCCCCAGAGATCATTCAGTCATTGCTCATGACGGTGGCCAACAATTTTGTCACT
GACAAGAACTCTGGAGAAGTTATGACCGTAGGAATCAATGCCATCAAAGAGATAACAGCTCGATGTCCCCTAGCCATGAC
TGAAGAACTTCTCCAAGACCTGGCTCAGTATAAAACACACAAAGATAAGAATGTGATGATGTCTGCTAGAACTTTGATTC
AGCTCTTCCGAACACTGAATCCTCAGATGTTGCACAAGAAATTCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATGGGTGGGAAAGTGCCAGTCTCAGTGAGGAGGAGGACGATGATGGCGAAATGGTCGACGTGCCCC
ACTCTTCCGATGAAGAACAGCGAGAAGTTACGAAGAAGCTGGACAGCATGCCTATGGAGGAGCGGAAAGCCAAAGCTGCA
GCCATCAGCACGAGTCGCGTTTTAACGCAGGAAGACTTCCAGAAGATCCGCGTGGCCCAGATGAGGAAAGAGCTCAGTGC
TGCTCCCGGGAAGGCGGAAAAGAGGAAGTTCATAGAGATAGACAGCGACGAGGAGCCCAGGGGCGAGTTACTTTCCCTGC
GAGACATCGAGCGCCTTCATAAAAAGCCAAAGTCTGACAAGGAGACGAGACTGGCGACCGCAATGGCTGGGAAAACAGAC
CGAAAAGAATTTGTGAGGAAGAAAACCAAAATGAATCCATATTCAAGTTCCACAAATAAAGAGAAGAAGAAACAGAAGAA
CTATATGATGATGCGGTATAGCCAGAATGTCCGGACAAAAAATAAGCGCTCCTTCAGAGAAAAGCAGCTGGCGCTACGAG
ATGCACTTAAAAAGAGAAAGCGAATGAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008521 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006441 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012217 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006682 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017503 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000027034 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000022229 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000008974 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_779 | 89.87 | 59.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1946 | 59.09 | 55.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000004811 retrocopies