Parental gene:

UBE2C, ENSETEG00000012346

Aliases:None
Description:ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_5156:16634..29104(+)


>ENSETEG00000012346
ATGGCCTCCCAAAACCGCGACCCAGCCGCAGCCAGTGTCGTAGCCGCCCGAAAAGGAGCCGAGCCCAGCGGGGGCGCAGC
CCGGGGTTCCGTGGGCAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCTGATGACAAAGGAATCTCTGCCTTCC
CGGAATCAGACAACCTTTTCAAGTGGATAGGGACCATCCACGGAGCAGCTGGTACAGTCTATGAAGACCTGAGGTATAAA
CTCTCCCTGGAGTTCCCCAGTGGCTACCCTTACAATGCGCCCACAGTGAAGTTC

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000014102 possible_ortholog 2 retrogenes
Loxodonta africana ENSLAFG00000003164 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000021023 possible_ortholog 4 retrogenes
Monodelphis domestica ENSMODG00000013661 possible_ortholog 6 retrogenes
Mustela putorius furo ENSMPUG00000017619 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000004989 possible_ortholog 3 retrogenes
Pan troglodytes ENSPTRG00000013564 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_157 57.75 71.43
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2. retro_etel_221 82.83 100.00
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3. retro_etel_321 63.64 78.57
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4. retro_etel_324 84.85 100.00
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5. retro_etel_400 78.79 100.00
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6. retro_etel_628 82.83 100.00
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7. retro_etel_689 78.79 100.00
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8. retro_etel_764 55.84 77.55
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9. retro_etel_824 81.44 98.98
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10. retro_etel_909 80.61 100.00
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11. retro_etel_1212 86.73 100.00
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12. retro_etel_1500 75.36 70.41
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13. retro_etel_1560 57.75 70.41
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14. retro_etel_1634 65.00 100.00
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15. retro_etel_1729 83.67 100.00
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16. retro_etel_1853 67.65 69.39
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17. retro_etel_1856 78.35 97.96
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18. retro_etel_2013 51.32 76.53
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Download FASTA sequences of all ENSETEG00000012346 retrocopies