Parental gene:

PAICS, ENSETEG00000015242

Aliases:None
Description:phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:HGNC Symbol;Acc:8587]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_2049:200370..209715(+)


>ENSETEG00000015242
GCGCTTTCCCCAGGTCAATTGAATCCCGCTTCTCCACTTCACGCGGTCGCAGCCCCCAGCCTACTCGAGATAATGGCGGC
TTCCGAGGTGGTGTCCGGTCCAAAGCTCTACGAGGGGAAAACAAAAGAAGTCTATGAGCTGGTCCATCACCCAGGGAAAG
TGCTTCTGCAATCCAAGGACCAGATTACAGCAGGGAACGCAGCTAGAAAGAACCACCTGGAGGGCAAAGCTGCGATTTCC
AATAAAATCACCAGTTGTATTTTTCAGTTGTTACAGGATGCAGGTATCAAAACTGCTTTCACCAAGACATGGGGGGAAAC
GGCTTTCATTGCCCCCCAGTGTGAAATGATTCCCATTGAGTGGGTATGTAGAAGAATAGCAACTGGTTCTTTTCTCAAAA
GAAACCCTGGCGTCAAGGAAGGTTATAAGTTTTACCCACCCAAAGTGGAGATGTTTTTCAAGGATGATGCCAATAATGAC
CCACAGTGGTCTGAGGAGCAGCTAATTGCTGCCAAATTTTGCTTTGCTGGACTTGAGATAGGTCAAACTGAAGTGGATAT
CATGAGTCATGCCACCCAGGCCATTTTTGAAATCTTGGAAAAGTGTTGGTTGCCCCAGGACTGTACACTGGTTGACATGA
AGATTGAATTTGGTGTTGATGTAACCACCAAAGAAATTATTCTTGCTGATGTTATTGATAACGATTCCTGGAGACTCTGG
CCATCTGGAGATCGAAGCCAACAGAAGGACAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTTCTGAAATCACAAAGTCAGTGCAGGGTTGTAGTAT
TGATGGGCTCGACCTCTGATCTCCGTCACTGCGAAAAAATCAAGGAGGCTTGTGGAAATTTTGGCATCCCATGTGAACTT
CGAGTAACATCTGCCCATAAGGGCCCAGATGAAACTCTGAGGATTAAAGCTGAGTATGAAGGGGATGGCATTCCTACTGT
CTTTGTGGCGGTAGCAGGCAGGAGCAATGGTTTGGGAGTGCTGTCTGGGAACACTGCGTATCCAGTGATCAGCTGTCCTC
CCCTCACACCAGACTGGGGGGCTCAGGAGGTGTGGTCTTCTCTTCGGCTACCCAGTGGTCTCGGCTGTTCGACTATACTT
TCTCCAGAAGCATCAGCTCAGTTTGCTGCTCAGATCTTTGGCTTGAACAATCATTTGGTATGGGCCAAACTGCGAGGAAG
CATCTTAAATACGTGGATTTCCCTGAAGCAGGCTGACAAGAAAATCAGAGAATGCAGTTTA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010577 ortholog_one2one 1 retrogene
retro_btau_508,
Cavia porcellus ENSCPOG00000010749 ortholog_one2one 1 retrogene
retro_cpor_969,
Dasypus novemcinctus ENSDNOG00000013413 ortholog_one2one 1 retrogene
retro_dnov_284,
Homo sapiens ENSG00000128050 ortholog_one2one 3 retrogenes
retro_hsap_3802, retro_hsap_3915, retro_hsap_3927,
Gorilla gorilla ENSGGOG00000024392 ortholog_one2one 1 retrogene
retro_ggor_2643,
Mus musculus ENSMUSG00000029247 ortholog_one2one 6 retrogenes
retro_mmus_1748, retro_mmus_2750, retro_mmus_2858, retro_mmus_3126, retro_mmus_653, retro_mmus_971,
Nomascus leucogenys ENSNLEG00000008786 ortholog_one2one 2 retrogenes
retro_nleu_1274, retro_nleu_2156,
Otolemur garnettii ENSOGAG00000003575 ortholog_one2one 2 retrogenes
retro_ogar_2138, retro_ogar_865,
Procavia capensis ENSPCAG00000008531 ortholog_one2one 1 retrogene
retro_pcap_172,
Pan troglodytes ENSPTRG00000016081 ortholog_one2one 2 retrogenes
retro_ptro_2662, retro_ptro_2670,
Rattus norvegicus ENSRNOG00000002101 ortholog_one2many 3 retrogenes
retro_rnor_1891, retro_rnor_2768, retro_rnor_804,
Tupaia belangeri ENSTBEG00000006751 ortholog_one2one 1 retrogene
retro_tbel_3697,
Tarsius syrichta ENSTSYG00000010497 ortholog_one2one 2 retrogenes
retro_tsyr_2170, retro_tsyr_329,
Drosophila melanogaster FBgn0020513 ortholog_one2many 1 retrogene
retro_dmel_82,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_341 76.42 54.81
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2. retro_etel_1918 90.65 54.36
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Download FASTA sequences of all ENSETEG00000015242 retrocopies