Parental gene:

NKAP, ENSFCAG00000004392

Aliases:None
Description:NFKB activating protein [Source:HGNC Symbol;Acc:29873]
Organism:Cat (Felis catus)
Coordinates:X:97184337..97208696(-)


>ENSFCAG00000004392
ATGGCTCCGGTGTCGCGTTCGCGCAGCCCGGAGGGGGAGGCCTCGGGCTTTGGGGGGAAGCGTCGCAGTTTGTCCAAGAG
CCCTAAGCCCAGCAAATCCGCCCGCTCCCCGCGGGGCCGCCGCTCCCGCTCGAGCTCTCGCTCGCACTCTTGCTCTCGGT
CTGGGGACCGGAATGGTGTCAGCCATCAGCTAGGTGGCTTCAGCCAAGGGTCCCGAAACCAGTCTTACAGATCCCGCTCG
CGGTCACGCTCCCGAGAGCGGCCCTCGGCGCCGCGGGGCAGCCTCTTCACTTCGGCCTCATCGACCGCGTATTATGGCGG
CTACTCACGCCCCTACGGGAGCGACAAGCCGTGGCCTAGCCTTCTGGACAAGGAGAGGGAGGAGAGCTTGCGGCAAAAGA
GATTAAGTGAGAGAGAGAGGATTGGAGAATTGGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCAGAACCAGAC
TCTGATGAACACACACCAGTAGAGGATGATGAGCCAAAGAAAAGCACTACTTCAGCTTCTACTTCAGAAGAAGAAAAGAA
GAAGAAGAAGAAGAGGAAGTCTAGTCATTCAAAAGAAAGGTCCAAGAAAAAGAGAAAGAAAAAATCATCTAAAAGAAAAC
GCAAGAAGTATTCTGACAGCGACAGTGACTCTGACTCTGAAACGGACTCCAGTGATGAAGATACAAAAAGAAGAGGAAAG
AAAGCCAAGAAAAAGGAAAAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAAGTCTAAGAAGAATAGAAAAGA
TTCCAGTGATTCAAGCTCTAAAGATTCCCAAGAAGAGTTTCTGGAGAATCCCTGGAAGGATCGATCAAAGCCTGAAGAAC
CCTCAGATTTAATTGGCCCAGAGGCTCCGAAAACACTTGCCTCTCAGGATGATAAACCTTTGAACTATGGCCATGCACTG
TTGCCTGGTGAGGGTGCAGCTATGGCTGAATACGTAAAAGCTGGGAAACGTATCCCAAGAAGAGGTGAAATTGGCTTGAC
AAGTGAAGAAATTGCATCGTTCGAATGCTCGGGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCCGTGCGAC
TGCGGAAAGAGAACCAGATCTATAGTGCTGATGAGAAGAGAGCCCTGGCGTCCTTTAACCAAGAAGAGAGGCGAAAGAGA
GAAAACAAGATTCTGGCCAGTTTTCGAGAGATGGTATACCGAAAAACTAAAGGGAAAGATGACAAATAA

Library Parental gene expression (RPM)
SRP017611_liver 5 .66 RPM
SRP017611_kidney 9 .28 RPM
SRP017611_brain 7 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018433 ortholog_one2one 1 retrogene
retro_cfam_172,
Dasypus novemcinctus ENSDNOG00000000072 ortholog_one2one 1 retrogene
retro_dnov_50,
Echinops telfairi ENSETEG00000001007 ortholog_one2many 1 retrogene
retro_etel_1882,
Homo sapiens ENSG00000101882 ortholog_one2one 1 retrogene
retro_hsap_15,
Loxodonta africana ENSLAFG00000002962 ortholog_one2one 1 retrogene
retro_lafr_37,
Macaca mulatta ENSMMUG00000012382 ortholog_one2one 1 retrogene
retro_mmul_121,
Mus musculus ENSMUSG00000016409 ortholog_one2one 1 retrogene
retro_mmus_279,
Nomascus leucogenys ENSNLEG00000014922 ortholog_one2one 1 retrogene
retro_nleu_88,
Otolemur garnettii ENSOGAG00000001004 ortholog_one2one 1 retrogene
retro_ogar_239,
Pongo abelii ENSPPYG00000020679 ortholog_one2one 1 retrogene
retro_pabe_198,
Pan troglodytes ENSPTRG00000022233 ortholog_one2one 1 retrogene
retro_ptro_117,
Rattus norvegicus ENSRNOG00000031169 ortholog_one2one 1 retrogene
retro_rnor_93,
Sus scrofa ENSSSCG00000012613 ortholog_one2one 1 retrogene
retro_sscr_13,
Ictidomys tridecemlineatus ENSSTOG00000001134 ortholog_one2one 1 retrogene
retro_itri_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_10 69.39 81.04
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000004392 retrocopies