Parental gene: | PSME2, ENSFCAG00000005585 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) activator subunit 2 (PA28 beta) [Source:HGNC Symbol;Acc:9569] |
| Organism: | Cat (Felis catus) |
| Coordinates: | B3:76105658..76109898(-) |
>ENSFCAG00000005585
ATGGCCAAGCCTTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGATATCTTCAGGCAAAATCTTTTTCAGGA
GGCAGAGGAATTCCTCTACAGATTCTTACCACAGAAAATCATATACCTGAATCAACTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACCTCTCTCCGGGCCCCACTAGACATCCCCATCCCAGACCCCCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGCTTTCTCCCTGGAAATGAGAAGGTTCTCGCCCTACTTGCCCTGGT
TAAGCCAGAAGTGTGGACTCTCAAAGAAAAATGCATTCTGGTGATCACATGGATCCAGCACCTGATCCCCAAGATTGAGG
ATGGAAATGACTTTGGGGTGGCAATCCAGGAGAAGGTGCTGGAGAGGGTGAATGCAGTCAAGACTAAAGTGGAAGCCTTC
CAAACAACCATTTCCAAGTACTTCTCAGAACGCGGGGATGCTGTGGCCAAGGCCTCTAAGGAGACTCATGTAATGGATTA
CCGGGCCCTGGTACATGAGCGAGATGAGGCAGCCTATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTACG
TGAGTGTGGAGAAATTATACTGCAGGACATTCATTAAGTTCTCTTTCCCCCTTCCTTCAGCCGATTGCCGTCTTTAT
ATGGCCAAGCCTTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGATATCTTCAGGCAAAATCTTTTTCAGGA
GGCAGAGGAATTCCTCTACAGATTCTTACCACAGAAAATCATATACCTGAATCAACTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACCTCTCTCCGGGCCCCACTAGACATCCCCATCCCAGACCCCCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGCTTTCTCCCTGGAAATGAGAAGGTTCTCGCCCTACTTGCCCTGGT
TAAGCCAGAAGTGTGGACTCTCAAAGAAAAATGCATTCTGGTGATCACATGGATCCAGCACCTGATCCCCAAGATTGAGG
ATGGAAATGACTTTGGGGTGGCAATCCAGGAGAAGGTGCTGGAGAGGGTGAATGCAGTCAAGACTAAAGTGGAAGCCTTC
CAAACAACCATTTCCAAGTACTTCTCAGAACGCGGGGATGCTGTGGCCAAGGCCTCTAAGGAGACTCATGTAATGGATTA
CCGGGCCCTGGTACATGAGCGAGATGAGGCAGCCTATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTACG
TGAGTGTGGAGAAATTATACTGCAGGACATTCATTAAGTTCTCTTTCCCCCTTCCTTCAGCCGATTGCCGTCTTTAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 21 .23 RPM |
| SRP017611_kidney | 19 .58 RPM |
| SRP017611_brain | 8 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007167 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000005583 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009769 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000079197 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016584 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002004 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1605 | 90.35 | 94.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000005585 retrocopies