Parental gene: | ENSCJAG00000007167 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:48185335..48189456(-) |
>ENSCJAG00000007167
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAGGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACTTCCCTCCGGGCCACACTGGACATCCCCATCCCAGATCCTCCACCTAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGATTTCTCCCTGGGAATGAGAAGGTCCTGTCCCTGCTTGCCCTGGT
TAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCATTCTGTTAATCACGTGGATCCAGCACCTGATCCCCAAGATTGAAG
ATGGAAATGATTTTGGAGTAGCAATCCAGGAGAAGGTACTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTC
CAGACAACCATTTCCAAGTACTTCTCAGAACGTGGGGATGCTGTGGCCAAGGCCTCCAAGGAGACTCATGTGATGGATTA
CCGGGCCTTGGTGCACGAGCGAGATGAGGCAGCCTATGGGGAACTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATG
CTGAGCTTTATCATATCATAAGCAGCAACCTGGAGAAAATTGTCAACCCAAAGGGTGAAGAGAAGCCATCTATGTACTGA
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAGGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACCTGACTTCCCTCCGGGCCACACTGGACATCCCCATCCCAGATCCTCCACCTAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGTCCCTAAGTGTGGATTTCTCCCTGGGAATGAGAAGGTCCTGTCCCTGCTTGCCCTGGT
TAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCATTCTGTTAATCACGTGGATCCAGCACCTGATCCCCAAGATTGAAG
ATGGAAATGATTTTGGAGTAGCAATCCAGGAGAAGGTACTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTC
CAGACAACCATTTCCAAGTACTTCTCAGAACGTGGGGATGCTGTGGCCAAGGCCTCCAAGGAGACTCATGTGATGGATTA
CCGGGCCTTGGTGCACGAGCGAGATGAGGCAGCCTATGGGGAACTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATG
CTGAGCTTTATCATATCATAAGCAGCAACCTGGAGAAAATTGTCAACCCAAAGGGTGAAGAGAAGCCATCTATGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 39 .83 RPM |
| SRP051959_skeletal_muscle | 6 .51 RPM |
| SRP051959_lymph_node | 37 .97 RPM |
| SRP051959_lung | 21 .57 RPM |
| SRP051959_liver | 26 .30 RPM |
| SRP051959_kidney | 22 .45 RPM |
| SRP051959_heart | 11 .65 RPM |
| SRP051959_colon | 22 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013111 | within_species_paralog | 1 retrogene | |
| Felis catus | ENSFCAG00000005585 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000100911 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016025 | ortholog_one2many | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009769 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012473 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000079197 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015260 | ortholog_one2many | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016584 | ortholog_many2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005684 | ortholog_one2many | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000006196 | ortholog_one2many | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000002004 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_71 | 99.16 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_233 | 91.21 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_322 | 96.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000007167 retrocopies