Parental gene:

Psme2, ENSMUSG00000079197

Aliases:Psme2, AA589371, AI788882, PA28b
Description:proteasome (prosome, macropain) 28 subunit, beta [Source:MGI Symbol;Acc:MGI:1096365]
Organism:Mouse (Mus musculus)
Coordinates:14:55587440..55591113(-)


>ENSMUSG00000079197
ATGGCCAAGCCTTGTGGGGTCCGCTTGAGTGGAGAAGCCCGAAAACAGGTGGATGTCTTCAGACAAAATCTTTTCCAGGA
GGCTGATGACTTCCTCTGCACTTTCTTGCCACGGAAAATCATATCCCTGAGTCAGCTCTTGCAGGAGGATTCCCTCAATG
TGGCCGACCTCTCCTCCCTCCGGGCTCCTCTGGACATCCCTATCCCAGATCCTCCACCCAAGGATGACGAGATGGAAACA
GACAAGCAGGAGAAGAAGGAAGTCCCTAAGTGTGGCTACCTCCCGGGGAACGAGAAGCTTCTGGCCTTGCTCGCTTTGGT
TAAGCCAGAAGTCTGGACTCTCAAAGAGAAGTGCATTCTGGTAATCACATGGATCCAGCACCTGATCCCCAAGATTGAGG
ATGGAAATGATTTTGGGGTGGCAATTCAGGAGAAGGTGCTGGAGAGAGTGAATGCTGTCAAGACCAAAGTAGAAGCTTTC
CAGACAACCATTTCCAAGTACTTCTCAGAACGAGGGGACGCTGTAGCCAAGGCTTCCAAGGACACCCATGTAATGGATTA
CCGGGCCTTGGTGCATGAGCGAGATGAAGCAGCCTATGGGGCGCTTAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATG
CTGAGCTTTATCATATCATCAGCAGCAACCTAGAGAAAATCGTCAACCCGAAGGGTGAAGAAAAGCCATCGATGTACTGA

Library Parental gene expression (RPM)
SRP007412_brain 12 .69 RPM
SRP007412_cerebellum 15 .37 RPM
SRP007412_heart 31 .32 RPM
SRP007412_kidney 44 .41 RPM
SRP007412_liver 67 .97 RPM
SRP007412_testis 6 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007167 ortholog_many2many 3 retrogenes
retro_cjac_233, retro_cjac_322, retro_cjac_71,
Felis catus ENSFCAG00000005585 possible_ortholog 1 retrogene
retro_fcat_1605,
Homo sapiens ENSG00000100911 ortholog_one2many 4 retrogenes
retro_hsap_1200, retro_hsap_2999, retro_hsap_3033, retro_hsap_3222,
Gorilla gorilla ENSGGOG00000016025 ortholog_one2many 4 retrogenes
retro_ggor_2078, retro_ggor_2093, retro_ggor_2188, retro_ggor_935,
Myotis lucifugus ENSMLUG00000009769 possible_ortholog 1 retrogene
retro_mluc_2172,
Macaca mulatta ENSMMUG00000012473 ortholog_one2many 4 retrogenes
retro_mmul_1229, retro_mmul_1919, retro_mmul_1940, retro_mmul_2281,
Mus musculus ENSMUSG00000022216 within_species_paralog 1 retrogene
retro_mmus_466,
Nomascus leucogenys ENSNLEG00000015260 ortholog_one2many 4 retrogenes
retro_nleu_2086, retro_nleu_2726, retro_nleu_3086, retro_nleu_844,
Otolemur garnettii ENSOGAG00000016584 ortholog_many2many 1 retrogene
retro_ogar_61,
Pongo abelii ENSPPYG00000005684 ortholog_one2many 4 retrogenes
retro_pabe_1000, retro_pabe_2486, retro_pabe_2512, retro_pabe_2669,
Pan troglodytes ENSPTRG00000006196 ortholog_one2many 4 retrogenes
retro_ptro_2028, retro_ptro_2046, retro_ptro_2172, retro_ptro_820,
Sus scrofa ENSSSCG00000002004 possible_ortholog 1 retrogene
retro_sscr_302,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_145 100.00 100.00
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Download FASTA sequences of all ENSMUSG00000079197 retrocopies