Parental gene:

NIF3L1, ENSFCAG00000023186

Aliases:None
Description:NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:13390]
Organism:Cat (Felis catus)
Coordinates:C1:186766756..186788202(+)


>ENSFCAG00000023186
ATGTTATCTCGTGTACTCCTCACTCCCACAACAATCCGGCTTGTTCATTCCCCGATCTGCAGTTCTTCCCGTTCCTTCAT
GGATTTGAAGGTTCTCCTTTCCTCCTTGAATGACTTTGCATCCCTCTCACTTGCTGAGAGTTGGGACAATGTTGGATTAC
TGGTGGAACCAAGCCCACCACACACTGTAAACACACTCTTCCTTACCAATGACTTGACCGAGGAAGTGATGGAGGAGGCG
CTGCAAAAGAAGTCGGATCTTATTCTCTCCTACCATCCGCCTATTTTCCGACCTTTGACGCACATAACCTGGAAAACATG
GAAGGAGCGCCTGGTGATTCAGGCTCTGGAAAACAGAGTTGGTATTTACTCTCCTCACACAGCCTATGATGCTGCACCCC
AGGGAGTCAATAGCTGGTTGGCTAAAGGGCTTGGAGTTTGCACCTCCAGGCCCATACATCCTTCCAAAGCTGCCAACTAC
CCAACGGGGGGAACGCACAGAGTAGAATTCAGTGTTAACTCCACCCAACACCTGGACAAAGTCATTTCTGCAGTGAAAGA
AATTGCAAATATTTCTATCACTTCTTTTTCTACTAGGACTGATGATGAAGAACAAACACGGATTAGTCTGAATTGTAGTC
AGGAGGCTTTGTTACAGGTGATGGCTTTTCTTTCCCAGAACAGACAATTCTATCAGAAGACTGAAATTCTGTTACTGGAG
AAGCCTCCACTTCCGCAAACTGGGATGGGACGGTTGTGCACACTGGATGAGCCTGCTTCCTTGGCAACCATGATTGAGCG
AATCAAAAGGCACCTTAAACTAGCTCATGTTCGCCTTGCTCTTGGGGTAGGAAGGACCTTAGAGTCTCCAGTCAGAGTCG
TGGCCCTGTGTGCTGGTTCTGGGAGCACCGTGCTGCAGGGGGTAGAGGCTGACCTTTACCTCACAGGTGAGATGTCCCAT
CATGATGTTCTGGATGCTGCATCCCAAGGAATAAATGTCATCCTCTGTGAACATAGCAACACTGAACGAGGTTTTCTTTC
TGATCTTCGAGATATGCTGGGTGCTCACTTGGAAAATAAGATTAATATTATCCTGTCAGAAAGAGACAGGGACCCTCTTC
ATGTGATTTAA

Library Parental gene expression (RPM)
SRP017611_liver 9 .10 RPM
SRP017611_kidney 24 .42 RPM
SRP017611_brain 23 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Macaca mulatta ENSMMUG00000006639 ortholog_one2one 1 retrogene
retro_mmul_444,
Nomascus leucogenys ENSNLEG00000006935 ortholog_one2one 1 retrogene
retro_nleu_1504,
Oryctolagus cuniculus ENSOCUG00000010667 possible_ortholog 16 retrogenes
retro_ocun_1105, retro_ocun_1534, retro_ocun_1539, retro_ocun_1691, retro_ocun_1692, retro_ocun_1710, retro_ocun_1729, retro_ocun_1749, retro_ocun_1789, retro_ocun_1828, retro_ocun_1837, retro_ocun_1841, retro_ocun_1846, retro_ocun_1847, retro_ocun_1854, retro_ocun_929,
Pongo abelii ENSPPYG00000013063 ortholog_one2one 1 retrogene
retro_pabe_244,
Tupaia belangeri ENSTBEG00000000704 ortholog_one2one 1 retrogene
retro_tbel_3512,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_589 67.69 68.35
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Download FASTA sequences of all ENSFCAG00000023186 retrocopies