Parental gene:

NIF3L1, ENSMMUG00000006639

Aliases:None
Description:NIF3-like protein 1 [Source:RefSeq peptide;Acc:NP_001248662]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:64641246..64658045(+)


>ENSMMUG00000006639
ATGTTGTCATCTTGTGTACGCCCGGTCCCCACGACAGTCCGGTTTGTAGATTCTCTGATCTGCAGTTCTTCCCGTTCCTT
CATGGATTTGAAGGCTCTCCTTTCTTCCTTGAATGACTTTGCATCCCTCTCCTTTGCTGAGAGTTGGGACAATGTTGGAT
TACTGGTGGAACCAAGCCCACCACATACTGTAAATACGCTCTTCCTGACCAATGACCTGACTGAGGAAGTGATGGAGGAG
GGGCTGCAAAAGAAGGCAGACCTCATTCTCTCCTACCATCCGCCTATCTTCCGACCCATGAAGCGCATAACCTGGAACAC
CTGGAAGGAGCGCCTGGTGATCCAGGCTCTGGAGAACAGAGTCGGTATCTACTCTCCTCACACAGCCTATGATGCCGCAC
CCCAGGGCGTCAACAACTGGTTGGCTAAAGGGCTTGGAGCTTGTACCTCCAGGCCCATACATCCTTCCAAAGCTCCCAAC
TACCCTACAGAGGGAAACCACCGAGTAGAATTCAACGTTAGCCACACCCAAGCCCTGGACAAAGTCATGTCTGCAGTGAA
AGGAATTGGTGATGTTTCTGTCACTTCTTTTTCTGCTAGGTTTGATAATGAGGAACAAACACGGATTAGTCTGAATTGTA
CTCAGAAGGCTTTGATGCAGGTGGTAGATTTTCTTTCTCAGAACAAACAACTTTATCAGAAGACAGAAATTCTGTCGCTG
GAGAAGCCTTTGCTTCTACATACTGGAATGGGACGCTTATGCACACTGGATGAGTCTGTCTCCCTGGCAACCATGATTGA
TCGAATCAAAAGACACCTAAAACTATCTCATATTCGCTTAGCCCTTGGGGTGGGGAGAACCTTAGAGTCTCAAGTCAAAG
TTGTGGCCCTGTGTGCTGGTTCTGGGAGCGGCGTTCTGCAGGGTGTCAAGGCTGACCTTTACCTCACAGGTGAGATGTCC
CATCATGATATTTTGGATGCTGCTTCCCAAGGAATAAATGTCATCCTCTGTGAACATAGCAACACTGAACGAGGCTTTCT
TTCTGACCTTCGAGATATGCTGGGTTCTCACTTGGAGAATAAGATAAATATTATCCTATCAGAGACTGACAGGGACCCTC
TTCAGGTGGTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .11 RPM
SRP007412_brain 11 .09 RPM
SRP007412_cerebellum 12 .40 RPM
SRP007412_heart 6 .42 RPM
SRP007412_kidney 10 .68 RPM
SRP007412_liver 5 .82 RPM
SRP007412_testis 4 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000023186 ortholog_one2one 1 retrogene
retro_fcat_589,
Nomascus leucogenys ENSNLEG00000006935 ortholog_one2one 1 retrogene
retro_nleu_1504,
Oryctolagus cuniculus ENSOCUG00000010667 possible_ortholog 16 retrogenes
retro_ocun_1105, retro_ocun_1534, retro_ocun_1539, retro_ocun_1691, retro_ocun_1692, retro_ocun_1710, retro_ocun_1729, retro_ocun_1749, retro_ocun_1789, retro_ocun_1828, retro_ocun_1837, retro_ocun_1841, retro_ocun_1846, retro_ocun_1847, retro_ocun_1854, retro_ocun_929,
Pongo abelii ENSPPYG00000013063 ortholog_one2one 1 retrogene
retro_pabe_244,
Tupaia belangeri ENSTBEG00000000704 ortholog_one2one 1 retrogene
retro_tbel_3512,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_444 66.01 52.79
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Download FASTA sequences of all ENSMMUG00000006639 retrocopies