Parental gene:

MKRN1, ENSFCAG00000024942

Aliases:None
Description:makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112]
Organism:Cat (Felis catus)
Coordinates:A2:155109486..155126071(-)


>ENSFCAG00000024942
ATGTTTGCATTTCTAGCAAATTCCCAGGTGGTGCTGGTGCTGCCTAGTCCGGATTCCCTTAGGAAGTATTTCATGCATGG
GGTTTGTAAGGAAGGAGATAACTGTCGCTACTCGCATGACCTCTCTGACAGTCCGTATGGTGTAGTGTGCAAGTATTTTC
AGCGAGGATACTGTATTTACGGAGACCGCTGCAGATATGAACATAGCAAGCCACTGAAACAGGAAGAAGTGACCGTGGCA
GATCTAACTGCAAAATCATCCCTTGCTGCTTCCTCAAGTCTCTCATCGGTAGTTGGACCAGTTGTTGAAATGAATACGGG
CGAAGCCGACTCACGAAATTCAAACTTTGCAAGTGTAGGAGCAGGTTCAGAAGACTGGGTGAATGCCATTGAGTTTGTTC
CTGGCCAGCCCTACTGTGGCCGTACTGCCCCTTCCTGCACTGAGGCACCCCCGCAGGGCTCAGTGACCAAGGAAGAATGT
GAGAAGGAACAAACCGTGGCTGAAACAAAGAAGCAGCTTTGCCCGTATGCTGCCGTGGGAGAGTGCCGGTACGGGGAGAA
CTGCGTGTATCTCCACGGAGACTCCTGTGACATGTGTGGGCTGCAGGTTCTCCATCCCACGGACGCTGCCCAGAGATCAC
AACATATAAAATCCTGCATCGAGGCCCATGAGAAGGACATGGAGCTCTCGTTCGCTGTCCAGCGCAGCAAGGACATGGTC
TGCGGGGTCTGCATGGAGGTGGTCTATGAGAAAGCCAGCCCCAGCGAGCGCCGCTTTGGGATTCTCTCCAACTGCAGCCA
CACTTACTGTCTCAAGTGTATTCGCAAGTGGAGGAGTGCTAAGCAATTTGAGAGCAAGATCATAAAGTCCTGCCCAGAAT
GCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTGGGTGGAGGAGAAAGAAGAGAAGCAGAAACTCATTCAGAAA
TACAAAGAGGCAATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTT
TTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCACAGAGACAGAAAGTGGGAACATCAAGCAGATACCGGGCCC
AACGAAGGAACCACTTCTGGGAGCTCATTGAGGAAAGAGAGAACAGCAACCCATTTGACAACGACGAAGAGGAGGTTGTC
ACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCCGCAGGTGGGGACGACGACCTGACAGACTCTGAAGACGAGTG
GGACTTGTTTCATGATGAGCTGGAAGATTTTTATGACTTGGATCTATAG

Library Parental gene expression (RPM)
SRP017611_brain 75 .18 RPM
SRP017611_kidney 69 .67 RPM
SRP017611_liver 31 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008306 possible_ortholog 2 retrogenes
retro_btau_401, retro_btau_943,
Canis familiaris ENSCAFG00000003953 ortholog_one2many 2 retrogenes
retro_cfam_2157, retro_cfam_253,
Choloepus hoffmanni ENSCHOG00000011015 ortholog_one2one 3 retrogenes
retro_chof_173, retro_chof_2357, retro_chof_89,
Callithrix jacchus ENSCJAG00000013474 ortholog_one2many 2 retrogenes
retro_cjac_210, retro_cjac_2991,
Cavia porcellus ENSCPOG00000000948 possible_ortholog 1 retrogene
retro_cpor_109,
Dasypus novemcinctus ENSDNOG00000019564 ortholog_one2one 2 retrogenes
retro_dnov_1011, retro_dnov_388,
Homo sapiens ENSG00000133606 ortholog_one2one 4 retrogenes
retro_hsap_1140, retro_hsap_4197, retro_hsap_4676, retro_hsap_4859,
Gorilla gorilla ENSGGOG00000023977 ortholog_one2many 4 retrogenes
retro_ggor_119, retro_ggor_2813, retro_ggor_3031, retro_ggor_381,
Microcebus murinus ENSMICG00000002114 ortholog_one2one 1 retrogene
retro_mmur_1184,
Macaca mulatta ENSMMUG00000010420 ortholog_one2many 3 retrogenes
retro_mmul_191, retro_mmul_2597, retro_mmul_76,
Mus musculus ENSMUSG00000029922 ortholog_one2one 1 retrogene
retro_mmus_2663,
Nomascus leucogenys ENSNLEG00000001921 ortholog_one2one 4 retrogenes
retro_nleu_1027, retro_nleu_2167, retro_nleu_33, retro_nleu_939,
Otolemur garnettii ENSOGAG00000009877 ortholog_one2one 2 retrogenes
retro_ogar_3468, retro_ogar_424,
Pongo abelii ENSPPYG00000018057 ortholog_one2many 3 retrogenes
retro_pabe_3435, retro_pabe_3776, retro_pabe_947,
Pan troglodytes ENSPTRG00000019766 ortholog_one2one 5 retrogenes
retro_ptro_2849, retro_ptro_3106, retro_ptro_3234, retro_ptro_75, retro_ptro_776,
Tarsius syrichta ENSTSYG00000009996 ortholog_one2one 3 retrogenes
retro_tsyr_1256, retro_tsyr_1525, retro_tsyr_508,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_67 62.75 67.19
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Download FASTA sequences of all ENSFCAG00000024942 retrocopies