Parental gene: | MKRN1, ENSG00000133606 |
| Aliases: | MKRN1, RNF61 |
| Description: | makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 7:140152839..140179369(-) |
>ENSG00000133606
ATGGCGGAGGCTGCAACTCCCGGAACAACAGCCACAACATCAGGAGCAGGAGCGGCAGCGGCGACGGCGGCAGCAGCCTC
CCCCACCCCGATCCCCACAGTCACCGCCCCGTCCCTGGGGGCGGGCGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCG
GCTGGACTAAACAGGTCACCTGCAGGTATTTTATGCATGGGGTTTGTAAGGAAGGAGACAACTGTCGCTACTCGCATGAC
CTCTCTGACAGTCCGTATAGTGTAGTGTGCAAGTATTTTCAGCGAGGGTACTGTATTTATGGAGACCGCTGCAGATATGA
ACATAGCAAACCATTGAAACAGGAAGAAGCAACTGCTACAGAGCTAACTACAAAGTCATCCCTTGCTGCTTCCTCAAGTC
TCTCATCGATAGTTGGACCACTTGTTGAAATGAATACAGGCGAAGCTGAGTCAAGAAATTCAAACTTTGCAACTGTAGGA
GCAGGTTCAGAGGACTGGGTGAATGCTATTGAGTTTGTTCCTGGGCAACCCTACTGTGGCCGTACTGCGCCTTCCTGCAC
TGAAGCACCCCTGCAGGGCTCAGTGACCAAGGAAGAATCAGAGAAAGAGCAAACCGCCGTGGAGACAAAGAAGCAGCTGT
GCCCCTATGCTGCAGTGGGAGAGTGCCGATACGGGGAGAACTGTGTGTATCTCCACGGAGATTCTTGTGACATGTGTGGG
CTGCAGGTCCTGCATCCAATGGATGCTGCCCAGAGATCGCAGCATATCAAATCGTGCATTGAGGCCCATGAGAAGGACAT
GGAGCTCTCATTTGCCGTGCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACC
CCAGTGAGCGCCGCTTCGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGCATTCGCAAGTGGAGGAGTGCT
AAGCAATTTGAGAGCAAGATCATAAAGTCCTGCCCAGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTG
GGTGGAGGAGAAAGAAGAGAAGCAGAAACTCATTCTGAAATACAAGGAGGCAATGAGCAACAAGGCGTGCAGGTATTTTG
ATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCA
CAGAGACAGAAAGTGGGAACATCAAGCAGATACCGGGCCCAACGAAGGAACCACTTCTGGGAACTCATTGAGGAAAGAGA
GAACAGCAACCCCTTTGACAACGATGAAGAAGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTG
CAGGTGGGGACGACGAACTAACAGACTCTGAAGATGAGTGGGACTTGTTTCATGATGAGCTGGAAGATTTTTATGACTTG
GATCTATAG
ATGGCGGAGGCTGCAACTCCCGGAACAACAGCCACAACATCAGGAGCAGGAGCGGCAGCGGCGACGGCGGCAGCAGCCTC
CCCCACCCCGATCCCCACAGTCACCGCCCCGTCCCTGGGGGCGGGCGGAGGGGGCGGCGGCAGCGACGGCAGCGGCGGCG
GCTGGACTAAACAGGTCACCTGCAGGTATTTTATGCATGGGGTTTGTAAGGAAGGAGACAACTGTCGCTACTCGCATGAC
CTCTCTGACAGTCCGTATAGTGTAGTGTGCAAGTATTTTCAGCGAGGGTACTGTATTTATGGAGACCGCTGCAGATATGA
ACATAGCAAACCATTGAAACAGGAAGAAGCAACTGCTACAGAGCTAACTACAAAGTCATCCCTTGCTGCTTCCTCAAGTC
TCTCATCGATAGTTGGACCACTTGTTGAAATGAATACAGGCGAAGCTGAGTCAAGAAATTCAAACTTTGCAACTGTAGGA
GCAGGTTCAGAGGACTGGGTGAATGCTATTGAGTTTGTTCCTGGGCAACCCTACTGTGGCCGTACTGCGCCTTCCTGCAC
TGAAGCACCCCTGCAGGGCTCAGTGACCAAGGAAGAATCAGAGAAAGAGCAAACCGCCGTGGAGACAAAGAAGCAGCTGT
GCCCCTATGCTGCAGTGGGAGAGTGCCGATACGGGGAGAACTGTGTGTATCTCCACGGAGATTCTTGTGACATGTGTGGG
CTGCAGGTCCTGCATCCAATGGATGCTGCCCAGAGATCGCAGCATATCAAATCGTGCATTGAGGCCCATGAGAAGGACAT
GGAGCTCTCATTTGCCGTGCAGCGCAGCAAGGACATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACC
CCAGTGAGCGCCGCTTCGGGATCCTCTCCAACTGCAACCACACCTACTGTCTCAAGTGCATTCGCAAGTGGAGGAGTGCT
AAGCAATTTGAGAGCAAGATCATAAAGTCCTGCCCAGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTG
GGTGGAGGAGAAAGAAGAGAAGCAGAAACTCATTCTGAAATACAAGGAGGCAATGAGCAACAAGGCGTGCAGGTATTTTG
ATGAAGGACGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCA
CAGAGACAGAAAGTGGGAACATCAAGCAGATACCGGGCCCAACGAAGGAACCACTTCTGGGAACTCATTGAGGAAAGAGA
GAACAGCAACCCCTTTGACAACGATGAAGAAGAGGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTG
CAGGTGGGGACGACGAACTAACAGACTCTGAAGATGAGTGGGACTTGTTTCATGATGAGCTGGAAGATTTTTATGACTTG
GATCTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 33 .27 RPM |
| bodymap2_lung | 121 .84 RPM |
| bodymap2_breast | 98 .97 RPM |
| bodymap2_adipose | 106 .41 RPM |
| bodymap2_adrenal | 102 .47 RPM |
| bodymap2_skeletal_muscle | 109 .15 RPM |
| bodymap2_thyroid | 135 .98 RPM |
| bodymap2_prostate | 118 .23 RPM |
| bodymap2_colon | 157 .66 RPM |
| bodymap2_testis | 265 .36 RPM |
| bodymap2_brain | 85 .79 RPM |
| bodymap2_heart | 74 .12 RPM |
| bodymap2_white_blood_cells | 237 .73 RPM |
| bodymap2_lymph_node | 110 .87 RPM |
| bodymap2_ovary | 100 .41 RPM |
| bodymap2_kidney | 80 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000008306 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000003953 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000011015 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013474 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000000948 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000019564 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000024942 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023977 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000002114 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010420 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000029922 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001921 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009877 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000018057 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000019766 | ortholog_one2one | 5 retrogenes | |
| Sus scrofa | ENSSSCG00000016498 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009996 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000009528 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1140 | 84.77 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4197 | 86.05 | 62.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4676 | 88.08 | 88.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4859 | 82.23 | 72.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000133606 retrocopies