Parental gene:

VDAC2, ENSFCAG00000026943

Aliases:None
Description:voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672]
Organism:Cat (Felis catus)
Coordinates:D2:38006735..38018192(+)


>ENSFCAG00000026943
ATGGCGACCTATGGACAGAGCTGCGCGCGGCCAATGTGTATTCCTCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGA
TATTTTCAACAAGGGATTTGGTTTTGGGTTGGTGAAACTGGATGTGAAAACAAAGTCATGCAGTGGTGTGGAATTCTCAA
CATCTGGTTCATCTAACACAGACACTGGTAAAGTTACTGGAACCTTGGAGACCAAATATAAATGGTGTGAGTATGGTCTG
ACTTTCACAGAAAAATGGAACACTGATAACACTCTGGGAACAGAAATAGCAATTGAAGACCAGATTTGTCAAGGTTTGAA
ACTGACATTTGATACTACCTTTTCACCAAACACGGGAAAGAAAAGTGGTAAAATCAAGTCTTCTTACAAGAGGGAGTGTA
TAAACCTCGGTTGTGATGTTGACTTTGATTTTGCTGGACCTGCAATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGG
CTTGCTGGGTACCAGATGACCTTTGACAGTGCCAAATCAAAGCTGACAAGAAACAACTTTGCAGTGGGCTACAGGACTGG
GGATTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTGGAGGTTCAATTTATCAGAAAGTATGTGAAGATCTTG
ACACTTCAGTAAACCTTGCTTGGACATCAGGTACCAACTGCACTCGCTTTGGCATTGCAGCCAAATATCAGTTGGACCCC
ACTGCTTCCATTTCTGCAAAAGTCAACAACTCTAGTTTAATTGGAGTGGGCTATACTCAGACTCTGAGGCCTGGTGTCAA
GCTTACACTGTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAACTTGGGCTTGCCCTGGAGTTGGAGG
CTTAA

Library Parental gene expression (RPM)
SRP017611_liver 51 .35 RPM
SRP017611_kidney 128 .41 RPM
SRP017611_brain 88 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012975 ortholog_one2one 2 retrogenes
retro_btau_1252, retro_btau_1389,
Canis familiaris ENSCAFG00000015398 ortholog_one2one 1 retrogene
retro_cfam_376,
Callithrix jacchus ENSCJAG00000001145 ortholog_one2one 1 retrogene
retro_cjac_2385,
Felis catus ENSFCAG00000008421 within_species_paralog 1 retrogene
retro_fcat_1592,
Felis catus ENSFCAG00000010075 within_species_paralog 2 retrogenes
retro_fcat_1985, retro_fcat_599,
Homo sapiens ENSG00000165637 ortholog_one2one 1 retrogene
retro_hsap_2114,
Gorilla gorilla ENSGGOG00000005861 ortholog_one2one 5 retrogenes
retro_ggor_1677, retro_ggor_1949, retro_ggor_2934, retro_ggor_3036, retro_ggor_425,
Macropus eugenii ENSMEUG00000012995 possible_ortholog 1 retrogene
retro_meug_30,
Myotis lucifugus ENSMLUG00000007500 ortholog_one2one 2 retrogenes
retro_mluc_1710, retro_mluc_2252,
Mustela putorius furo ENSMPUG00000003268 ortholog_one2one 1 retrogene
retro_mputfur_354,
Mus musculus ENSMUSG00000021771 ortholog_one2one 1 retrogene
retro_mmus_2667,
Otolemur garnettii ENSOGAG00000030039 ortholog_one2one 1 retrogene
retro_ogar_2116,
Rattus norvegicus ENSRNOG00000013505 ortholog_one2many 1 retrogene
retro_rnor_2652,
Sarcophilus harrisii ENSSHAG00000012048 ortholog_one2one 1 retrogene
retro_shar_325,
Tupaia belangeri ENSTBEG00000001946 possible_ortholog 4 retrogenes
retro_tbel_1504, retro_tbel_1541, retro_tbel_1885, retro_tbel_4597,
Tarsius syrichta ENSTSYG00000004764 possible_ortholog 1 retrogene
retro_tsyr_14,
Vicugna pacos ENSVPAG00000008068 possible_ortholog 1 retrogene
retro_vpac_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_804 59.17 74.15
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2. retro_fcat_815 99.41 57.48
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3. retro_fcat_1385 80.00 61.22
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Download FASTA sequences of all ENSFCAG00000026943 retrocopies