Parental gene:

EIF4H, ENSFCAG00000029386

Aliases:None
Description:eukaryotic translation initiation factor 4H [Source:HGNC Symbol;Acc:12741]
Organism:Cat (Felis catus)
Coordinates:E3:10268132..10275895(+)


>ENSFCAG00000029386
GTGAAGAGTATTGAAGCGCAAAAACAAGTCATTTACTCACCTTGGTGGGGTGGGGGGAGTGAGAGCAGGTCCCGCGGCAG
TGCCGGTGGCCATGGTTCCCGTAGCCAGAAGGAGCTGCCCACAGAGCCCCCCTACACAGCATATGTAGGAAACCTACCTT
TTAATACAGTTCAGGGCGACATAGACGCTATCTTCAAGGATCTCAGCATACGGAGTGTACGGCTAGTCAGAGACAAAGAC
ACAGACAAATTTAAAGGTTTCTGCTATGTAGAATTTGATGAGGTGGATTCCCTGAAGGAAGCCTTGACATATGATGGTGC
ACTGTTGGGTGATCGGTCGCTTCGTGTGGACATTGCAGAAGGCAGAAAACAGGATAAAGGTGGCTTTGGCTTCAGGAAAG
GTGGACCAGATGACAGAGGAATGGGTGGCTCTCGAGAATCTAGAGGTGGATGGGATTCCCGGGATGACTTCAATTCCGGC
TTCAGGGATGACTTCTTAGGAGGCAGGGGAGGGAGTCGCCCAGGTGACCGGCGAACAGGCCCCCCAATGGGGAGTCGGTT
CAGAGATGGCCCTCCCCTTCGAGGGTCCAATATGGACTTCAGAGAACCAACAGAAGAGGAAAGAGCACAGAGGCCACGGC
TCCAGCTGAAGCCTCGAACAGTTGCCACGCCCCTCAATCAAGTAGCCAATCCCAACTCTGCCATCTTCGGGGGAGCCAGG
CCCAGAGAGGAAGTCGTTAACAAGGAGCAAGAATGA

Library Parental gene expression (RPM)
SRP017611_liver 25 .58 RPM
SRP017611_kidney 40 .91 RPM
SRP017611_brain 58 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002525 ortholog_one2one 2 retrogenes
retro_chof_1279, retro_chof_1903,
Gorilla gorilla ENSGGOG00000005284 ortholog_one2one 1 retrogene
retro_ggor_1598,
Macaca mulatta ENSMMUG00000006205 ortholog_one2one 2 retrogenes
retro_mmul_2634, retro_mmul_619,
Mus musculus ENSMUSG00000040731 ortholog_one2one 1 retrogene
retro_mmus_3659,
Oryctolagus cuniculus ENSOCUG00000017685 ortholog_one2one 1 retrogene
retro_ocun_1475,
Otolemur garnettii ENSOGAG00000028051 ortholog_one2one 1 retrogene
retro_ogar_2796,
Pongo abelii ENSPPYG00000017489 ortholog_one2one 2 retrogenes
retro_pabe_1879, retro_pabe_1988,
Pan troglodytes ENSPTRG00000019287 ortholog_one2one 1 retrogene
retro_ptro_1489,
Rattus norvegicus ENSRNOG00000001454 ortholog_one2one 1 retrogene
retro_rnor_2924,
Tupaia belangeri ENSTBEG00000009558 ortholog_one2one 2 retrogenes
retro_tbel_1636, retro_tbel_2470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_580 73.19 54.98
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Download FASTA sequences of all ENSFCAG00000029386 retrocopies