Parental gene:

Eif4h, ENSMUSG00000040731

Aliases:Eif4h, AU018978, D5Ertd355e, E430026L18Rik, Ef4h, Wbscr1, Wscr1, mKIAA0038
Description:eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
Organism:Mouse (Mus musculus)
Coordinates:5:134619879..134639348(-)


>ENSMUSG00000040731
ATGGCGGACTTCGATACCTACGACGATCGGGCCTACAGCAGCTTCGGCGGCGGTAGAGGGTCCCGAGGCAGTGCTGGTGG
CCATGGGTCCCGGAGCCAGAAGGAGCTACCCACAGAGCCCCCCTACACAGCTTACGTAGGAAATCTCCCTTTTAACACAG
TTCAGGGTGACATAGATGCTATCTTTAAGGATCTCAGCATACGGAGTGTGCGGCTAGTCAGAGACAAAGACACAGACAAA
TTTAAAGGGTTCTGCTATGTAGAATTTGATGAGGTGGATTCCCTGAAGGAGGCTCTGACTTATGACGGTGCACTCTTGGG
TGACCGGTCACTTCGTGTGGACATTGCAGAAGGCAGAAAACAAGATAAAGGTGGCTTTGGATTCAGGAAAGGTGGACCTG
ATGACAGAGGAATGGGTGGCTCTCGAGAATCTAGAGGTGGATGGGATTCCCGGGATGACTTCAACTCTGGCTACAGGGAT
GACTTCTTAGGGGGTAGGGGGGGCAGTCGCCCTGGGGACCGGCGAGCAGGCCCTCCAATGGGGAGTCGCTTTCGAGATGG
CCCTCCTCTGCGTGGCTCCAACATGGACTTCAGAGAACCCACAGAAGAGGAACGAGCACAGAGACCTCGGCTGCAGCTTA
AACCTCGGACAGTGGCAACGCCCCTCAATCAAGTAGCCAACCCCAACTCAGCCATCTTTGGGGGAGCCAGGCCCAGAGAG
GAAGTGGTTCAGAAGGAGCAAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 258 .44 RPM
SRP007412_cerebellum 213 .11 RPM
SRP007412_heart 116 .52 RPM
SRP007412_kidney 142 .85 RPM
SRP007412_liver 114 .64 RPM
SRP007412_testis 211 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002525 ortholog_one2one 2 retrogenes
retro_chof_1279, retro_chof_1903,
Felis catus ENSFCAG00000029386 ortholog_one2one 1 retrogene
retro_fcat_580,
Gorilla gorilla ENSGGOG00000005284 ortholog_one2one 1 retrogene
retro_ggor_1598,
Macaca mulatta ENSMMUG00000006205 ortholog_one2one 2 retrogenes
retro_mmul_2634, retro_mmul_619,
Mus musculus ENSMUSG00000058655 within_species_paralog 1 retrogene
retro_mmus_3686,
Oryctolagus cuniculus ENSOCUG00000017685 ortholog_one2one 1 retrogene
retro_ocun_1475,
Otolemur garnettii ENSOGAG00000028051 ortholog_one2one 1 retrogene
retro_ogar_2796,
Pongo abelii ENSPPYG00000017489 ortholog_one2one 2 retrogenes
retro_pabe_1879, retro_pabe_1988,
Pan troglodytes ENSPTRG00000019287 ortholog_one2one 1 retrogene
retro_ptro_1489,
Rattus norvegicus ENSRNOG00000001454 ortholog_one2one 1 retrogene
retro_rnor_2924,
Tupaia belangeri ENSTBEG00000009558 ortholog_one2one 2 retrogenes
retro_tbel_1636, retro_tbel_2470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3659 63.77 54.03
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Download FASTA sequences of all ENSMUSG00000040731 retrocopies