Parental gene: | FAM136A, ENSG00000035141 |
| Aliases: | None |
| Description: | family with sequence similarity 136, member A [Source:HGNC Symbol;Acc:25911] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:70523106..70529222(-) |
>ENSG00000035141
ATGGCTGAGCTGCAGCAGCTCCGGGTGCAGGAGGCGGTGGAGTCCATGGTGAAGAGTCTGGAAAGAGAGAACATCCGGAA
GATGCAGGGTCTCATGTTCCGGTGCAGCGCCAGCTGTTGTGAGGACAGCCAGGCCTCCATGAAGCAGGTGCACCAGTGCA
TCGAGCGCTGCCATGTGCCTCTGGCTCAAGCCCAGGCTTTGGTCACCAGTGAGCTGGAGAAGTTCCAGGACCGCCTGGCC
CGGTGCACCATGCATTGCAACGACAAAGCCAAAGATTCAATAGATGCTGGGAGTAAGGAGCTTCAGGTGAAGCAGCAGCT
GGACAGTTGTGTGACCAAGTGTGTGGATGACCACATGCACCTCATCCCAACTATGACCAAGAAGATGAAGGAGGCTCTCT
TATCAATTGGAAAATAA
ATGGCTGAGCTGCAGCAGCTCCGGGTGCAGGAGGCGGTGGAGTCCATGGTGAAGAGTCTGGAAAGAGAGAACATCCGGAA
GATGCAGGGTCTCATGTTCCGGTGCAGCGCCAGCTGTTGTGAGGACAGCCAGGCCTCCATGAAGCAGGTGCACCAGTGCA
TCGAGCGCTGCCATGTGCCTCTGGCTCAAGCCCAGGCTTTGGTCACCAGTGAGCTGGAGAAGTTCCAGGACCGCCTGGCC
CGGTGCACCATGCATTGCAACGACAAAGCCAAAGATTCAATAGATGCTGGGAGTAAGGAGCTTCAGGTGAAGCAGCAGCT
GGACAGTTGTGTGACCAAGTGTGTGGATGACCACATGCACCTCATCCCAACTATGACCAAGAAGATGAAGGAGGCTCTCT
TATCAATTGGAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 23 .98 RPM |
| bodymap2_lung | 9 .07 RPM |
| bodymap2_breast | 26 .30 RPM |
| bodymap2_adipose | 16 .10 RPM |
| bodymap2_adrenal | 26 .24 RPM |
| bodymap2_skeletal_muscle | 5 .93 RPM |
| bodymap2_thyroid | 31 .50 RPM |
| bodymap2_prostate | 32 .22 RPM |
| bodymap2_colon | 32 .04 RPM |
| bodymap2_testis | 23 .81 RPM |
| bodymap2_brain | 14 .72 RPM |
| bodymap2_heart | 13 .40 RPM |
| bodymap2_white_blood_cells | 20 .08 RPM |
| bodymap2_lymph_node | 26 .39 RPM |
| bodymap2_ovary | 26 .41 RPM |
| bodymap2_kidney | 38 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015992 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000008674 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000003353 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000009117 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000019447 | ortholog_one2one | 7 retrogenes | |
| Felis catus | ENSFCAG00000008119 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023247 | ortholog_one2one | 6 retrogenes | |
| Macropus eugenii | ENSMEUG00000015791 | ortholog_one2one | 8 retrogenes | |
| Macaca mulatta | ENSMMUG00000007962 | ortholog_one2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000011533 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000057497 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012323 | ortholog_one2one | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000012030 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016273 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026446 | ortholog_one2one | 6 retrogenes | |
| Tupaia belangeri | ENSTBEG00000017418 | ortholog_one2one | 8 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001198 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1855 | 83.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2599 | 81.62 | 98.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2683 | 88.89 | 91.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3136 | 57.58 | 93.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3413 | 87.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000035141 retrocopies