Parental gene:

MSMO1, ENSG00000052802

Aliases:MSMO1, DESP4, ERG25, SC4MOL
Description:methylsterol monooxygenase 1 [Source:HGNC Symbol;Acc:10545]
Organism:Human (Homo sapiens)
Coordinates:4:166248774..166264312(+)


>ENSG00000052802
ATGGCAACAAATGAAAGTGTCAGCATCTTTAGTTCAGCATCCTTGGCTGTGGAATATGTAGATTCACTTTTACCTGAGAA
TCCTCTGCAAGAACCATTTAAAAATGCTTGGAACTATATGTTGAATAATTATACAAAGTTCCAGATTGCAACATGGGGAT
CCCTTATAGTTCATGAAGCCCTTTATTTCTTATTCTGTTTACCTGGATTTTTATTTCAATTTATACCTTATATGAAAAAA
TACAAAATTCAAAAGGATAAGCCAGAGACATGGGAAAACCAATGGAAGTGTTTCAAAGTTCTTCTCTTTAATCACTTCTG
TATCCAGCTGCCTTTGATTTGTGGAACCTATTATTTTACAGAGTATTTCAATATTCCTTATGATTGGGAAAGAATGCCAA
GATGGTATTTTCTTTTGGCAAGATGCTTTGGTTGTGCAGTCATTGAAGATACTTGGCACTATTTTCTGCATAGACTCTTA
CACCACAAAAGAATATACAAGTATATTCATAAAGTTCATCATGAGTTTCAGGCTCCATTTGGAATGGAAGCTGAATATGC
ACATCCTTTGGAGACTCTAATTCTTGGAACTGGATTTTTCATTGGAATCGTGCTTTTGTGTGATCATGTAATTCTTCTTT
GGGCATGGGTGACCATTCGTTTATTAGAAACTATTGATGTCCATAGTGGTTATGATATTCCTCTCAACCCTTTAAATCTG
ATCCCTTTCTATGCTGGTTCTCGGCATCATGATTTCCACCACATGAACTTCATTGGAAACTATGCTTCAACATTTACATG
GTGGGATCGAATTTTTGGAACAGACTCTCAGTATAATGCCTATAATGAAAAGAGGAAGAAGTTTGAGAAAAAGACTGAAT
AA

Library Parental gene expression (RPM)
bodymap2_liver 482 .65 RPM
bodymap2_lung 318 .92 RPM
bodymap2_breast 28 .19 RPM
bodymap2_adipose 18 .53 RPM
bodymap2_adrenal 34 .68 RPM
bodymap2_skeletal_muscle 7 .46 RPM
bodymap2_thyroid 18 .21 RPM
bodymap2_prostate 28 .40 RPM
bodymap2_colon 25 .54 RPM
bodymap2_testis 74 .30 RPM
bodymap2_brain 84 .60 RPM
bodymap2_heart 8 .82 RPM
bodymap2_white_blood_cells 22 .17 RPM
bodymap2_lymph_node 32 .45 RPM
bodymap2_ovary 125 .51 RPM
bodymap2_kidney 72 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005596 ortholog_one2one 1 retrogene
retro_amel_447,
Choloepus hoffmanni ENSCHOG00000007550 ortholog_one2many 2 retrogenes
retro_chof_1657, retro_chof_560,
Callithrix jacchus ENSCJAG00000009301 ortholog_one2one 1 retrogene
retro_cjac_2245,
Felis catus ENSFCAG00000023004 ortholog_one2one 1 retrogene
retro_fcat_863,
Gorilla gorilla ENSGGOG00000015730 ortholog_one2one 1 retrogene
retro_ggor_2898,
Loxodonta africana ENSLAFG00000007061 ortholog_one2many 1 retrogene
retro_lafr_570,
Macaca mulatta ENSMMUG00000012994 ortholog_one2one 1 retrogene
retro_mmul_2486,
Nomascus leucogenys ENSNLEG00000006501 ortholog_one2one 1 retrogene
retro_nleu_2164,
Oryctolagus cuniculus ENSOCUG00000003769 ortholog_one2one 1 retrogene
retro_ocun_1454,
Otolemur garnettii ENSOGAG00000009281 ortholog_one2many 2 retrogenes
retro_ogar_182, retro_ogar_3404,
Pan troglodytes ENSPTRG00000016574 ortholog_one2one 1 retrogene
retro_ptro_3104,
Pteropus vampyrus ENSPVAG00000013707 ortholog_one2one 4 retrogenes
retro_pvam_1405, retro_pvam_550, retro_pvam_598, retro_pvam_784,
Sorex araneus ENSSARG00000013546 ortholog_one2one 1 retrogene
retro_sara_635,
Sarcophilus harrisii ENSSHAG00000000135 ortholog_one2one 1 retrogene
retro_shar_530,
Tursiops truncatus ENSTTRG00000012897 ortholog_one2many 2 retrogenes
retro_ttru_20, retro_ttru_801,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4672 74.68 67.69
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Download FASTA sequences of all ENSG00000052802 retrocopies