Parental gene:

TMED2, ENSG00000086598

Aliases:TMED2, P24A, RNP24, p24
Description:transmembrane emp24 domain trafficking protein 2 [Source:HGNC Symbol;Acc:16996]
Organism:Human (Homo sapiens)
Coordinates:12:124069077..124083116(+)


>ENSG00000086598
ATGGTGACGCTTGCTGAACTGCTGGTGCTTCTGGCCGCTCTCCTGGCCACGGTCTCGGGCTATTTCGTTAGCATCGACGC
CCATGCTGAAGAGTGCTTCTTTGAGCGGGTCACCTCGGGCACCAAGATGGGCCTCATCTTCGAGGTGGCGGAGGGCGGCT
TCCTGGACATCGACGTGGAGATTACAGGACCAGATAACAAAGGAATTTACAAAGGAGACAGAGAATCCAGTGGGAAATAC
ACATTTGCTGCTCACATGGATGGAACATACAAATTTTGTTTTAGTAACCGGATGTCCACCATGACTCCAAAAATAGTGAT
GTTCACCATTGATATTGGGGAGGCTCCAAAAGGACAAGATATGGAAACAGAAGCTCACCAGAACAAGCTAGAAGAAATGA
TCAATGAGCTAGCAGTGGCGATGACAGCTGTAAAGCACGAACAGGAATACATGGAAGTCCGGGAGAGAATACACAGAGCC
ATCAACGACAACACAAACAGCAGAGTGGTCCTTTGGTCCTTCTTTGAAGCTCTTGTTCTAGTTGCCATGACATTGGGACA
GATCTACTACCTGAAGAGATTTTTTGAAGTCCGGAGAGTTGTTTAA

Library Parental gene expression (RPM)
bodymap2_liver 388 .34 RPM
bodymap2_lung 255 .08 RPM
bodymap2_breast 333 .91 RPM
bodymap2_adipose 256 .94 RPM
bodymap2_adrenal 192 .74 RPM
bodymap2_skeletal_muscle 186 .15 RPM
bodymap2_thyroid 351 .88 RPM
bodymap2_prostate 251 .73 RPM
bodymap2_colon 286 .07 RPM
bodymap2_testis 255 .69 RPM
bodymap2_brain 149 .08 RPM
bodymap2_heart 127 .58 RPM
bodymap2_white_blood_cells 209 .71 RPM
bodymap2_lymph_node 221 .15 RPM
bodymap2_ovary 369 .27 RPM
bodymap2_kidney 282 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015262 ortholog_one2one 2 retrogenes
retro_amel_1923, retro_amel_337,
Bos taurus ENSBTAG00000039630 ortholog_one2one 2 retrogenes
retro_btau_52, retro_btau_819,
Choloepus hoffmanni ENSCHOG00000012728 ortholog_one2one 6 retrogenes
retro_chof_104, retro_chof_1277, retro_chof_2323, retro_chof_2601, retro_chof_2709, retro_chof_981,
Callithrix jacchus ENSCJAG00000020466 ortholog_one2one 1 retrogene
retro_cjac_1392,
Echinops telfairi ENSETEG00000000556 ortholog_one2one 2 retrogenes
retro_etel_2109, retro_etel_2154,
Gorilla gorilla ENSGGOG00000028536 ortholog_one2one 1 retrogene
retro_ggor_1943,
Macaca mulatta ENSMMUG00000031491 ortholog_one2one 2 retrogenes
retro_mmul_1439, retro_mmul_613,
Mustela putorius furo ENSMPUG00000001598 ortholog_one2one 1 retrogene
retro_mputfur_1241,
Mus musculus ENSMUSG00000029390 ortholog_one2one 2 retrogenes
retro_mmus_1361, retro_mmus_3262,
Nomascus leucogenys ENSNLEG00000001652 ortholog_one2one 2 retrogenes
retro_nleu_2454, retro_nleu_2794,
Otolemur garnettii ENSOGAG00000009192 ortholog_one2one 1 retrogene
retro_ogar_2548,
Pongo abelii ENSPPYG00000005090 ortholog_one2one 3 retrogenes
retro_pabe_1919, retro_pabe_2227, retro_pabe_3597,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2793 80.00 82.09
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Download FASTA sequences of all ENSG00000086598 retrocopies