Parental gene:

HOMER2, ENSG00000103942

Aliases:HOMER2, ACPD, CPD, HOMER-2, VESL-2
Description:homer homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:17513]
Organism:Human (Homo sapiens)
Coordinates:15:83509837..83654661(-)


>ENSG00000103942
ATGGGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGC
GAGCAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCA
AGGTGATCATAAACAGCACAATCACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGC
AGAGCCAACACAGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAA
AGAAGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTAATCATTCCCAAGAATCTGGGCGTG
AAACCCCATCTTCTACTCAGGCATCCAGTGTCAACGGGACGGACGATGAAAAGGCCTCTCACGCCGGTCCAGCCAACACA
CACCTGAAGTCTGAGAATGACAAGCTGAAGATTGCCTTGACGCAGAGCGCAGCCAACGTGAAGAAGTGGGAGATCGAGCT
GCAGACCCTTCGGGAGAGCAATGCACGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGC
AGTTCTCCATCTGCCGTGATGAGAATGACCGGCTCCGCAACAAGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAAC
AGAGAGAAGGAGAAGAACACGCAGCTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCT
GAAAGATCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGG
CAGAGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGAGGAGAGCAAATACCGACAGCGC
CACCTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGACGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGGCT
CTCCAAGCTGGGCACCGATAACTAG

Library Parental gene expression (RPM)
bodymap2_liver 41 .68 RPM
bodymap2_lung 7 .70 RPM
bodymap2_breast 18 .00 RPM
bodymap2_adipose 1 .29 RPM
bodymap2_adrenal 2 .33 RPM
bodymap2_skeletal_muscle 66 .22 RPM
bodymap2_thyroid 82 .14 RPM
bodymap2_prostate 18 .55 RPM
bodymap2_colon 12 .84 RPM
bodymap2_testis 18 .49 RPM
bodymap2_brain 24 .26 RPM
bodymap2_heart 28 .78 RPM
bodymap2_white_blood_cells 4 .10 RPM
bodymap2_lymph_node 3 .22 RPM
bodymap2_ovary 10 .45 RPM
bodymap2_kidney 12 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015884 ortholog_one2one 3 retrogenes
retro_cjac_3556, retro_cjac_3614, retro_cjac_3871,
Cavia porcellus ENSCPOG00000014688 ortholog_one2many 1 retrogene
retro_cpor_35,
Equus caballus ENSECAG00000023619 ortholog_one2one 3 retrogenes
retro_ecab_1046, retro_ecab_661, retro_ecab_692,
Macaca mulatta ENSMMUG00000008297 ortholog_one2one 1 retrogene
retro_mmul_2278,
Nomascus leucogenys ENSNLEG00000010953 ortholog_one2one 1 retrogene
retro_nleu_3002,
Pongo abelii ENSPPYG00000006735 ortholog_one2one 5 retrogenes
retro_pabe_1209, retro_pabe_1210, retro_pabe_1217, retro_pabe_3566, retro_pabe_3568,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1468 72.76 68.36
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Download FASTA sequences of all ENSG00000103942 retrocopies