Parental gene: | HOMER2, ENSMMUG00000008297 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 7:63643612..63682313(+) |
>ENSMMUG00000008297
AGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAG
CAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGG
TGATCATAAACAGCACAATCACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGA
GCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAAAGA
AGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCAAGAATCTGGGCGTGAAA
CCCCATCTTCTACTCAGGCATCCAGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCCGCCAACACGCAC
CTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAATGGGAGATCGAGCTGCA
GACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGT
TCTCCATCTGCCGCGACGAGAACGATGGGCTCCGCAACAAGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGA
GAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAA
AGATCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAG
AGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGAGGAGAGCAAATACCGACAGCGCCAC
CTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTC
CAAGCTGGGCACCGATAACTAG
AGAGAACAGCCCATCTTCACCACCCGAGCGCATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGATGCCTGCGAG
CAAGCAGGCGGTCACCGTTTCCTACTTCTATGATGTCACAAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGG
TGATCATAAACAGCACAATCACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGCAGA
GCCAACACGGTGTTTGGTTTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCAGGAGGTGAAAGA
AGCTGCCAAGATAGCCAAAGACAAGACGCAGGAGAAAATCGAGACCTCAAGTGATCATTCCCAAGAATCTGGGCGTGAAA
CCCCATCTTCTACTCAGGCATCCAGTGTCAATGGGACGGACGATGAAAAGGCCTCTCACACCGGTCCCGCCAACACGCAC
CTGAAGTCTGAGAATGATAAGCTGAAGATTGCCTTGACGCAGAGCGCTGCCAACGTGAAGAAATGGGAGATCGAGCTGCA
GACCCTGCGGGAGAGCAATGCCCGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGT
TCTCCATCTGCCGCGACGAGAACGATGGGCTCCGCAACAAGATTGATGAGCTGGAAGAACAATGCAGTGAGATCAACAGA
GAGAAGGAGAAGAACACACAACTGAAGAGGAGGATCGAGGAGCTGGAGGCAGAGCTCCGAGAAAAGGAGACAGAGCTGAA
AGATCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGCGAATATGTCTCTGAGAAGCTAGAGGCGGCAG
AGAGAGACAATCAAAACCTGGAAGACAAAGTGCGTTCCTTAAAGACAGACATTGAGGAGAGCAAATACCGACAGCGCCAC
CTGAAGGTGGAGTTGAAGAGCTTCCTGGAGGTGCTGGATGGGAAGATTGACGACCTGCATGACTTCCGCCGAGGCCTCTC
CAAGCTGGGCACCGATAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .58 RPM |
| SRP007412_brain | 10 .98 RPM |
| SRP007412_cerebellum | 12 .14 RPM |
| SRP007412_heart | 27 .79 RPM |
| SRP007412_kidney | 39 .44 RPM |
| SRP007412_liver | 31 .07 RPM |
| SRP007412_testis | 4 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015884 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000014688 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000023619 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000103942 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010953 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006735 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2278 | 70.87 | 57.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000008297 retrocopies