Parental gene:

SF3B14, ENSG00000115128

Aliases:SF3B6, HSPC175, Ht006, P14, SAP14, SAP14a, SF3B14, SF3B14a
Description:Pre-mRNA branch site protein p14 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y3B4]
Organism:Human (Homo sapiens)
Coordinates:2:24290453..24299313(-)


>ENSG00000115128
ATGGCGATGCAAGCGGCCAAGAGGGCGAACATTCGACTTCCACCTGAAGTAAATCGGATATTGTATATAAGAAATTTGCC
ATACAAAATCACAGCTGAAGAAATGTATGATATATTTGGGAAATATGGACCTATTCGTCAAATCAGAGTGGGGAACACAC
CTGAAACTAGAGGAACAGCTTATGTGGTCTATGAGGACATCTTTGATGCCAAGAATGCATGTGATCACCTATCGGGATTC
AATGTTTGTAACAGATACCTTGTGGTTTTGTACTATAATGCCAACAGGGCATTTCAGAAGATGGACACAAAGAAGAAGGA
GGAACAGTTGAAGCTTCTCAAGGAGAAATATGGCATCAACACAGATCCACCAAAATAA

Library Parental gene expression (RPM)
bodymap2_liver 29 .07 RPM
bodymap2_lung 39 .91 RPM
bodymap2_breast 40 .37 RPM
bodymap2_adipose 28 .74 RPM
bodymap2_adrenal 43 .03 RPM
bodymap2_skeletal_muscle 17 .90 RPM
bodymap2_thyroid 44 .18 RPM
bodymap2_prostate 50 .56 RPM
bodymap2_colon 48 .36 RPM
bodymap2_testis 54 .39 RPM
bodymap2_brain 19 .60 RPM
bodymap2_heart 21 .89 RPM
bodymap2_white_blood_cells 39 .40 RPM
bodymap2_lymph_node 40 .00 RPM
bodymap2_ovary 38 .21 RPM
bodymap2_kidney 43 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002786 ortholog_one2one 1 retrogene
retro_amel_1594,
Bos taurus ENSBTAG00000003407 ortholog_one2one 1 retrogene
retro_btau_606,
Choloepus hoffmanni ENSCHOG00000000689 ortholog_one2one 3 retrogenes
retro_chof_1217, retro_chof_2457, retro_chof_351,
Callithrix jacchus ENSCJAG00000007716 ortholog_one2one 2 retrogenes
retro_cjac_2632, retro_cjac_487,
Dasypus novemcinctus ENSDNOG00000007148 ortholog_one2one 1 retrogene
retro_dnov_1313,
Equus caballus ENSECAG00000015618 ortholog_one2one 1 retrogene
retro_ecab_733,
Felis catus ENSFCAG00000031365 ortholog_one2one 1 retrogene
retro_fcat_247,
Macaca mulatta ENSMMUG00000001282 ortholog_one2one 1 retrogene
retro_mmul_1262,
Mustela putorius furo ENSMPUG00000013957 ortholog_one2one 1 retrogene
retro_mputfur_882,
Nomascus leucogenys ENSNLEG00000000815 ortholog_one2one 1 retrogene
retro_nleu_2806,
Otolemur garnettii ENSOGAG00000004468 ortholog_one2one 1 retrogene
retro_ogar_2877,
Pongo abelii ENSPPYG00000012603 ortholog_one2one 2 retrogenes
retro_pabe_1098, retro_pabe_1461,
Pan troglodytes ENSPTRG00000011709 ortholog_one2one 1 retrogene
retro_ptro_1187,
Sorex araneus ENSSARG00000011902 ortholog_one2one 1 retrogene
retro_sara_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1773 86.52 70.40
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Download FASTA sequences of all ENSG00000115128 retrocopies