Parental gene:

PLEKHA3, ENSG00000116095

Aliases:None
Description:pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:HGNC Symbol;Acc:14338]
Organism:Human (Homo sapiens)
Coordinates:2:179345194..179370093(+)


>ENSG00000116095
ATGGAGGGGGTGTTGTACAAGTGGACCAACTATCTCACAGGCTGGCAGCCTCGTTGGTTTGTTTTAGATAATGGAATCTT
ATCCTACTATGATTCACAAGATGATGTTTGCAAAGGGAGCAAAGGAAGCATAAAGATGGCAGTTTGTGAAATTAAAGTTC
ATTCAGCAGACAACACAAGAATGGAATTAATCATTCCTGGAGAGCAGCATTTCTACATGAAGGCAGTGAATGCAGCTGAA
AGACAGAGGTGGCTGGTCGCTCTGGGGAGCTCCAAAGCATGTTTGACTGATACAAGGACTAAAAAAGAAAAAGAAATAAG
TGAAACCAGTGAATCGCTGAAAACCAAAATGTCTGAACTTCGCCTCTACTGTGACCTCTTAATGCAGCAAGTTCATACAA
TACAGGAATTTGTTCACCATGATGAGAATCATTCATCTCCTAGTGCAGAGAACATGAATGAAGCCTCTTCTCTGCTTAGT
GCCACGTGTAACACATTCATCACAACGCTTGAGGAATGTGTGAAGATAGCCAATGCCAAGTTTAAACCTGAGATGTTTCA
ACTGCACCATCCGGATCCCTTAGTTTCTCCTGTGTCACCTTCTCCTGTTCAAATGATGAAGCGTTCTGTCAGCCACCCTG
GTTCTTGCAGTTCAGAGAGGAGTAGCCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCTCCCAGCGACGCCGA
AGAACCTACTCAGATACAGATTCTTGTAGTGATATTCCTCTTGAAGACCCAGATAGACCTGTTCACTGTTCAAAAAATAC
ACTTAATGGAGATTTGGCATCAGCAACCATTCCTGAAGAAAGCAGACTTATGGCCAAAAAACAATCTGAATCAGAAGATA
CTCTTCCATCCTTCTCTTCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 18 .94 RPM
bodymap2_adrenal 20 .76 RPM
bodymap2_brain 27 .87 RPM
bodymap2_breast 23 .44 RPM
bodymap2_colon 36 .33 RPM
bodymap2_heart 26 .95 RPM
bodymap2_kidney 31 .68 RPM
bodymap2_liver 9 .27 RPM
bodymap2_lung 31 .84 RPM
bodymap2_lymph_node 28 .12 RPM
bodymap2_ovary 25 .99 RPM
bodymap2_prostate 31 .66 RPM
bodymap2_skeletal_muscle 5 .06 RPM
bodymap2_testis 44 .15 RPM
bodymap2_thyroid 22 .41 RPM
bodymap2_white_blood_cells 25 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013997 ortholog_one2one 5 retrogenes
retro_chof_1366, retro_chof_1559, retro_chof_300, retro_chof_736, retro_chof_985,
Cavia porcellus ENSCPOG00000003906 ortholog_one2one 1 retrogene
retro_cpor_487,
Dasypus novemcinctus ENSDNOG00000002717 ortholog_one2one 1 retrogene
retro_dnov_107,
Erinaceus europaeus ENSEEUG00000004169 ortholog_one2one 1 retrogene
retro_eeur_416,
Homo sapiens ENSG00000106086 within_species_paralog 1 retrogene
retro_hsap_1110,
Homo sapiens ENSG00000139433 within_species_paralog 1 retrogene
retro_hsap_755,
Macropus eugenii ENSMEUG00000015317 ortholog_one2one 2 retrogenes
retro_meug_1530, retro_meug_341,
Microcebus murinus ENSMICG00000009898 ortholog_one2one 1 retrogene
retro_mmur_617,
Myotis lucifugus ENSMLUG00000005823 ortholog_one2one 2 retrogenes
retro_mluc_1031, retro_mluc_689,
Oryctolagus cuniculus ENSOCUG00000005495 ortholog_one2one 1 retrogene
retro_ocun_1273,
Otolemur garnettii ENSOGAG00000002724 ortholog_one2one 1 retrogene
retro_ogar_1845,
Tupaia belangeri ENSTBEG00000007550 ortholog_one2one 3 retrogenes
retro_tbel_4186, retro_tbel_4555, retro_tbel_4723,
Tarsius syrichta ENSTSYG00000005341 ortholog_one2one 1 retrogene
retro_tsyr_869,
Tursiops truncatus ENSTTRG00000009729 ortholog_one2one 2 retrogenes
retro_ttru_1296, retro_ttru_1497,
Vicugna pacos ENSVPAG00000003490 ortholog_one2one 3 retrogenes
retro_vpac_487, retro_vpac_578, retro_vpac_619,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2060 95.18 55.33
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Download FASTA sequences of all ENSG00000116095 retrocopies