Parental gene: | PLEKHA3, ENSVPAG00000003490 |
| Aliases: | None |
| Description: | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:HGNC Symbol;Acc:14338] |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | GeneScaffold_349:255553..278628(+) |
>ENSVPAG00000003490
TGGCAGCCGCGTTGGTTTGTTTTAGATAATGGAATCCTGTCCTACTATGATTCACAAGATGATGTTTGCAAAGGGAGCAA
AGGAAGTATAAAGATGGCAGTTTGTGAAATTAAAGTCCATTCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAAGTGAAACCAGTGAATCTCTGAAAACCAAAATGTCTGAGCTTCG
CCTCTACTGTGACCTCCTAATGCAGCAAGTTCATACAATCCAAGAATTTGTTCACCATGATGAGAATTGTTCATCTCCCA
GCATAGAGAACATGAATGAAGCCTCTTCTCTACTTAGTGCCACATGTAATACATTCATCACAACGCTTGAGGAATGTGTG
AAGATAGCGAACGCCAAGTTTAAACCTGAGATGTTTCAGCTGTCTCATCCGGATCCCTTAGTTTCTCCTGTGTCACCTTC
TCCTGTTCAAATGATGAAGCGTTCTGTCAGCCACCCTGGTTCTTGCAGTTCAGAGAGGAGTAGCCACTCTATAAAAGAAC
CAGTGTCTACACTTCACCGACTCTCCCAGAGACGCCGAAGAACCTACTCAGATACTGACTCTTGTAATGATGTTCCTCTT
GAAGACCCAGATAGACCTGTTCACTGTTCAAGAAATACTCTT
TGGCAGCCGCGTTGGTTTGTTTTAGATAATGGAATCCTGTCCTACTATGATTCACAAGATGATGTTTGCAAAGGGAGCAA
AGGAAGTATAAAGATGGCAGTTTGTGAAATTAAAGTCCATTCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATAAGTGAAACCAGTGAATCTCTGAAAACCAAAATGTCTGAGCTTCG
CCTCTACTGTGACCTCCTAATGCAGCAAGTTCATACAATCCAAGAATTTGTTCACCATGATGAGAATTGTTCATCTCCCA
GCATAGAGAACATGAATGAAGCCTCTTCTCTACTTAGTGCCACATGTAATACATTCATCACAACGCTTGAGGAATGTGTG
AAGATAGCGAACGCCAAGTTTAAACCTGAGATGTTTCAGCTGTCTCATCCGGATCCCTTAGTTTCTCCTGTGTCACCTTC
TCCTGTTCAAATGATGAAGCGTTCTGTCAGCCACCCTGGTTCTTGCAGTTCAGAGAGGAGTAGCCACTCTATAAAAGAAC
CAGTGTCTACACTTCACCGACTCTCCCAGAGACGCCGAAGAACCTACTCAGATACTGACTCTTGTAATGATGTTCCTCTT
GAAGACCCAGATAGACCTGTTCACTGTTCAAGAAATACTCTT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013997 | ortholog_one2one | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000003906 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002717 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004169 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116095 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000015317 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000009898 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005823 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005495 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002724 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007550 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005341 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009729 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_487 | 88.34 | 64.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_vpac_578 | 87.12 | 64.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_vpac_619 | 87.12 | 64.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSVPAG00000003490 retrocopies