Parental gene: | TOMM40, ENSG00000130204 |
| Aliases: | TOMM40, C19orf1, D19S1177E, PER-EC1, PEREC1, TOM40 |
| Description: | translocase of outer mitochondrial membrane 40 homolog (yeast) [Source:HGNC Symbol;Acc:18001] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:45393825..45406946(+) |
>ENSG00000130204
ATGGGGAACGTGTTGGCTGCCAGCTCGCCGCCCGCAGGGCCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCGCCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCAGCCTGGGCGCCGGCACCAGTACGAGTCGAAGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCGCCTCAGGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCG
GGCACATTCGAGGAGTGCCACCGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTTCAGGTCAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CATATGTGGGGACAAAGCAGCTGAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGGGAGTATCGGGGCTCTGACTTCACAGCAGCCGTCACCCTGGGGAACCCAGACGTCCTCGTGGGTT
CAGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTGGGTGGAGAGCTGGTCTACCACCGGCGG
CCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACATTGAACAACTGGTTGGCAACGGTAACGTTGGGCCA
GGCGGGCATGCACGCAACATACTACCACAAAGCCAGTGACCAGCTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGA
TGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCCAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGC
AACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCACCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCA
CCGCAAGAACAAGTTTCAGTGTGGCTTTGGCCTCACCATCGGCTGA
ATGGGGAACGTGTTGGCTGCCAGCTCGCCGCCCGCAGGGCCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCGCCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCAGCCTGGGCGCCGGCACCAGTACGAGTCGAAGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCGCCTCAGGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCG
GGCACATTCGAGGAGTGCCACCGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTTCAGGTCAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CATATGTGGGGACAAAGCAGCTGAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGGGAGTATCGGGGCTCTGACTTCACAGCAGCCGTCACCCTGGGGAACCCAGACGTCCTCGTGGGTT
CAGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTGGGTGGAGAGCTGGTCTACCACCGGCGG
CCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACATTGAACAACTGGTTGGCAACGGTAACGTTGGGCCA
GGCGGGCATGCACGCAACATACTACCACAAAGCCAGTGACCAGCTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGA
TGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCCAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGC
AACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCACCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCA
CCGCAAGAACAAGTTTCAGTGTGGCTTTGGCCTCACCATCGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 28 .86 RPM |
| bodymap2_lung | 14 .01 RPM |
| bodymap2_breast | 15 .64 RPM |
| bodymap2_adipose | 23 .56 RPM |
| bodymap2_adrenal | 42 .52 RPM |
| bodymap2_skeletal_muscle | 34 .01 RPM |
| bodymap2_thyroid | 28 .27 RPM |
| bodymap2_prostate | 18 .20 RPM |
| bodymap2_colon | 19 .86 RPM |
| bodymap2_testis | 32 .16 RPM |
| bodymap2_brain | 22 .57 RPM |
| bodymap2_heart | 12 .96 RPM |
| bodymap2_white_blood_cells | 10 .10 RPM |
| bodymap2_lymph_node | 17 .31 RPM |
| bodymap2_ovary | 33 .00 RPM |
| bodymap2_kidney | 27 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000014041 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000028928 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001726 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000023582 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011126 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009019 | ortholog_one2many | 1 retrogene | |
| Drosophila melanogaster | FBgn0016041 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1300 | 91.99 | 93.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1386 | 92.28 | 93.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2321 | 93.35 | 86.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2537 | 92.88 | 93.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3159 | 84.59 | 73.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000130204 retrocopies