Parental gene:

ENSSTOG00000009019

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393516.1:1500434..1509826(+)


>ENSSTOG00000009019
ATGGGGAACGTGTTGGCCGCTAGCTCGCCGCCCGCAGGGCCGCCGCCTCCACCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCGCCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTCGGAGGCGGCCTTGGTGCTGGGGCCAGCGCGGGTCGAGGTT
CGGACCGAACCGCGGGGGCTGCCACCGTCAGTGCCGCAGGGGTCGCTGACAACGGGGCCTGCGACTGCCTGCCCAACCCC
GGCACGTTCGAGGAGTGCCACCGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTTACAGTCAACAA
AGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CGTATGTGGGGACAAAGCAGCTGAGTCCCACAGAGGCCTTCCCAGTGCTGGTGGGTGACATGGATAACAGTGGCAGCCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCTGGCCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGATGGGGAGTACCGCGGTTCCGACTTCACGGCAGCCGTCACCCTAGGAAACCCAGACGTTCTCGTGGGTT
CAGGAATCCTCGTGGCCCACTACCTCCAGAGCATCACGCCATGCCTGGCCCTGGGTGGAGAGCTGGTCTACCACCGGCGG
CCCGGAGAGGAAGGCACCGTCATGTCGCTGGCTGGGAAATACACACTTAACAACTGGTTGGCCACAGTGACACTGGGCCA
AGCTGGCATGCACGCGACGTACTACCACAAAGCCAGTGACCAGCTACAGGTAGGCGTGGAGTTCGAGGCCAGCACGAGGA
TGCAGGACACTAGCGTCTCCTTTGGGTACCAGCTGGACCTGCCGAAGGCCAACCTCCTCTTCAAAGGCTCCGTGGACAGT
AACTGGATCGTGGGCGCCACCCTGGAGAAGAAGCTGCCGCCCCTGCCTCTGACGCTGGCCCTCGGGGCCTTCCTGAACCA
CCGCAAGAACAAGTTCCAGTGCGGCTTCGGCCTCACCATCGGCTGA

Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000130204 ortholog_one2many 5 retrogenes
retro_hsap_1300, retro_hsap_1386, retro_hsap_2321, retro_hsap_2537, retro_hsap_3159,
Gorilla gorilla ENSGGOG00000023033 ortholog_one2many 1 retrogene
retro_ggor_1356,
Microcebus murinus ENSMICG00000014041 ortholog_one2many 1 retrogene
retro_mmur_420,
Myotis lucifugus ENSMLUG00000028928 ortholog_one2many 1 retrogene
retro_mluc_697,
Macaca mulatta ENSMMUG00000014303 ortholog_one2many 1 retrogene
retro_mmul_1998,
Nomascus leucogenys ENSNLEG00000001726 ortholog_one2many 2 retrogenes
retro_nleu_2368, retro_nleu_2542,
Oryctolagus cuniculus ENSOCUG00000023582 ortholog_one2many 1 retrogene
retro_ocun_1143,
Pongo abelii ENSPPYG00000025858 ortholog_many2many 1 retrogene
retro_pabe_174,
Pan troglodytes ENSPTRG00000011126 ortholog_many2many 1 retrogene
retro_ptro_39,
Ictidomys tridecemlineatus ENSSTOG00000003800 within_species_paralog 2 retrogenes
retro_itri_301, retro_itri_724,
Drosophila melanogaster FBgn0016041 ortholog_many2many 1 retrogene
retro_dmel_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_150 98.89 100.00
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Download FASTA sequences of all ENSSTOG00000009019 retrocopies