Parental gene:

CCNH, ENSG00000134480

Aliases:CCNH, CAK, p34, p37
Description:cyclin H [Source:HGNC Symbol;Acc:1594]
Organism:Human (Homo sapiens)
Coordinates:5:86687310..86708836(-)


>ENSG00000134480
ATGTACCACAACAGTAGTCAGAAGCGGCACTGGACCTTCTCCAGCGAGGAGCAGCTGGCAAGACTGCGGGCTGACGCCAA
CCGCAAATTCAGATGCAAAGCCGTGGCCAACGGGAAGGTTCTTCCGAATGATCCAGTCTTTCTTGAGCCTCATGAAGAAA
TGACACTCTGCAAATACTATGAGAAAAGGTTATTGGAATTCTGTTCGGTGTTTAAGCCAGCAATGCCAAGATCTGTTGTG
GGTACGGCTTGTATGTATTTCAAACGTTTTTATCTTAATAACTCAGTAATGGAATATCACCCCAGGATAATAATGCTCAC
TTGTGCATTTTTGGCCTGCAAAGTAGATGAATTCAATGTATCTAGTCCTCAGTTTGTTGGAAACCTCCGGGAGAGTCCTC
TTGGACAGGAGAAGGCACTTGAACAGATACTGGAATATGAACTACTTCTTATACAGCAACTTAATTTCCACCTTATTGTC
CACAATCCTTACAGACCATTTGAGGGCTTCCTCATCGACTTAAAGACCCGCTATCCCATATTGGAGAATCCAGAGATTTT
GAGGAAAACAGCTGATGACTTTCTTAATAGAATTGCATTGACGGATGCTTACCTTTTATACACACCTTCCCAAATTGCCC
TGACTGCCATTTTATCTAGTGCCTCCAGGGCTGGAATTACTATGGAAAGTTATTTATCAGAGAGTCTGATGCTGAAAGAG
AACAGAACTTGCCTGTCACAGTTACTAGATATAATGAAAAGCATGAGAAACTTAGTAAAGAAGTATGAACCACCCAGATC
TGAAGAAGTTGCTGTTCTGAAACAGAAGTTGGAGCGATGTCATTCTGCTGAGCTTGCACTTAACGTAATCACGAAGAAGA
GGAAAGGCTATGAAGATGATGATTACGTCTCAAAGAAATCCAAACATGAGGAGGAAGAATGGACTGATGACGACCTGGTA
GAATCTCTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 16 .75 RPM
bodymap2_lung 40 .82 RPM
bodymap2_breast 39 .44 RPM
bodymap2_adipose 31 .88 RPM
bodymap2_adrenal 22 .86 RPM
bodymap2_skeletal_muscle 16 .73 RPM
bodymap2_thyroid 33 .78 RPM
bodymap2_prostate 26 .31 RPM
bodymap2_colon 11 .56 RPM
bodymap2_testis 73 .32 RPM
bodymap2_brain 37 .74 RPM
bodymap2_heart 15 .75 RPM
bodymap2_white_blood_cells 21 .79 RPM
bodymap2_lymph_node 14 .49 RPM
bodymap2_ovary 24 .35 RPM
bodymap2_kidney 21 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000007765 ortholog_one2one 1 retrogene
retro_dnov_1618,
Gorilla gorilla ENSGGOG00000005172 ortholog_one2one 1 retrogene
retro_ggor_2143,
Macaca mulatta ENSMMUG00000003248 ortholog_one2one 1 retrogene
retro_mmul_1991,
Mus musculus ENSMUSG00000021548 ortholog_one2one 1 retrogene
retro_mmus_2510,
Nomascus leucogenys ENSNLEG00000013604 ortholog_one2one 1 retrogene
retro_nleu_2248,
Oryctolagus cuniculus ENSOCUG00000004659 ortholog_one2one 1 retrogene
retro_ocun_588,
Pongo abelii ENSPPYG00000015619 ortholog_one2one 2 retrogenes
retro_pabe_2584, retro_pabe_2590,
Pan troglodytes ENSPTRG00000017063 ortholog_one2one 1 retrogene
retro_ptro_2116,
Ictidomys tridecemlineatus ENSSTOG00000000659 ortholog_one2one 1 retrogene
retro_itri_856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3128 77.43 69.66
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Download FASTA sequences of all ENSG00000134480 retrocopies