Parental gene: | CCNH, ENSPPYG00000015619 |
| Aliases: | None |
| Description: | cyclin-H [Source:RefSeq peptide;Acc:NP_001153279] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:87869022..87887557(-) |
>ENSPPYG00000015619
ATGTACCACAACAGTAGCCAGAAGCGGCACTGGACTTTCTCCAGTGAGGAGCAGCTGGCAAGACTGCGGGCCGACGCCAA
CCGCAAATTCAGATGCAAAGCCGTGGCCAACGGGAAGGTTCTTCCGAATGATCCAGTCTTTCTTGAGCCTCATGAAGAAA
TGACACTCTGCAAATACTATGAGAAAAGGTTATTGGAATTCTGTTCGGTGTTTAAGCCAGCAATGCCAAGGTCTGTTGTG
GGTACGGCTTGTATGTATTTCAAACGTTTTTACCTTAATAACTCAGTAATGGAATATCACCCCAGGATAATAATGCTCAC
TTGTGCATTTTTGGCCTGCAAAGTAGATGAATTCAATGTATCTAGTCCTCAGTTTGTTGGAAACCTTCGGGAGAGTCCTC
TTGGACAGGAGAAGGCACTTGAACAGATACTGGAATATGAACTACTTCTTATACAGCAACTTAATTTCCACCTTATTGTC
CACAATCCTTACAGACCATTTGAGGGCTTCCTCATCGACTTAAAGACCCGCTATCCCGTATTGGAGAATCCAGAGATTTT
GAGGAAAACAGCTGATGACTTTCTTAATAGAATTGCATTGACGGATGCTTACCTTTTGTACACACCTTCCCAAATTGCCC
TGACTGCCATTTTATCTAGTGCCTCCAGGGCTGGAATTACTATGGAAAGTTATTTATCAGAGAGTCTGATGCTGAGAGAG
AACAGAACTTGCCTGTCACAGTTACTAGATATAATGAAAAGCATGAGAAACTTAGTAAAAAAGTATGAACCACCCAGATC
TGAAGAAGTTGCTGTTCTGAAACAGAAGTTGGAGCGATGCCATTCTGCTGAGCTTGCACTTAACGTAATCACGAAGAAGA
GGAAAGGCTATGAAGATGATGATTACGTCTCAAAGAAATCCAAACATGAGGAGGAAGAATGGACTGACGACGACCTGGTA
GAATCTCTCTAA
ATGTACCACAACAGTAGCCAGAAGCGGCACTGGACTTTCTCCAGTGAGGAGCAGCTGGCAAGACTGCGGGCCGACGCCAA
CCGCAAATTCAGATGCAAAGCCGTGGCCAACGGGAAGGTTCTTCCGAATGATCCAGTCTTTCTTGAGCCTCATGAAGAAA
TGACACTCTGCAAATACTATGAGAAAAGGTTATTGGAATTCTGTTCGGTGTTTAAGCCAGCAATGCCAAGGTCTGTTGTG
GGTACGGCTTGTATGTATTTCAAACGTTTTTACCTTAATAACTCAGTAATGGAATATCACCCCAGGATAATAATGCTCAC
TTGTGCATTTTTGGCCTGCAAAGTAGATGAATTCAATGTATCTAGTCCTCAGTTTGTTGGAAACCTTCGGGAGAGTCCTC
TTGGACAGGAGAAGGCACTTGAACAGATACTGGAATATGAACTACTTCTTATACAGCAACTTAATTTCCACCTTATTGTC
CACAATCCTTACAGACCATTTGAGGGCTTCCTCATCGACTTAAAGACCCGCTATCCCGTATTGGAGAATCCAGAGATTTT
GAGGAAAACAGCTGATGACTTTCTTAATAGAATTGCATTGACGGATGCTTACCTTTTGTACACACCTTCCCAAATTGCCC
TGACTGCCATTTTATCTAGTGCCTCCAGGGCTGGAATTACTATGGAAAGTTATTTATCAGAGAGTCTGATGCTGAGAGAG
AACAGAACTTGCCTGTCACAGTTACTAGATATAATGAAAAGCATGAGAAACTTAGTAAAAAAGTATGAACCACCCAGATC
TGAAGAAGTTGCTGTTCTGAAACAGAAGTTGGAGCGATGCCATTCTGCTGAGCTTGCACTTAACGTAATCACGAAGAAGA
GGAAAGGCTATGAAGATGATGATTACGTCTCAAAGAAATCCAAACATGAGGAGGAAGAATGGACTGACGACGACCTGGTA
GAATCTCTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .01 RPM |
| SRP007412_cerebellum | 9 .61 RPM |
| SRP007412_heart | 6 .59 RPM |
| SRP007412_kidney | 6 .40 RPM |
| SRP007412_liver | 7 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000007765 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134480 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005172 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003248 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021548 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013604 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004659 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017063 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000659 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2584 | 76.99 | 69.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2590 | 72.69 | 66.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015619 retrocopies