Parental gene: | RAC1, ENSG00000136238 |
| Aliases: | RAC1, Rac-1, TC-25, p21-Rac1 |
| Description: | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 7:6414153..6443608(+) |
>ENSG00000136238
ATGCAGGCCATCAAGTGTGTGGTGGTGGGAGACGGAGCTGTAGGTAAAACTTGCCTACTGATCAGTTACACAACCAATGC
ATTTCCTGGAGAATATATCCCTACTGTCTTTGACAATTATTCTGCCAATGTTATGGTAGATGGAAAACCGGTGAATCTGG
GCTTATGGGATACAGCTGGACAAGAAGATTATGACAGATTACGCCCCCTATCCTATCCGCAAACAGTTGGAGAAACGTAC
GGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCGATTGCCGATGTGTTCTTAATTTGCTTTTCCCTTGTGAGTCCTGC
ATCATTTGAAAATGTCCGTGCAAAGTGGTATCCTGAGGTGCGGCACCACTGTCCCAACACTCCCATCATCCTAGTGGGAA
CTAAACTTGATCTTAGGGATGATAAAGACACGATCGAGAAACTGAAGGAGAAGAAGCTGACTCCCATCACCTATCCGCAG
GGTCTAGCCATGGCTAAGGAGATTGGTGCTGTAAAATACCTGGAGTGCTCGGCGCTCACACAGCGAGGCCTCAAGACAGT
GTTTGACGAAGCGATCCGAGCAGTCCTCTGCCCGCCTCCCGTGAAGAAGAGGAAGAGAAAATGCCTGCTGTTGTAA
ATGCAGGCCATCAAGTGTGTGGTGGTGGGAGACGGAGCTGTAGGTAAAACTTGCCTACTGATCAGTTACACAACCAATGC
ATTTCCTGGAGAATATATCCCTACTGTCTTTGACAATTATTCTGCCAATGTTATGGTAGATGGAAAACCGGTGAATCTGG
GCTTATGGGATACAGCTGGACAAGAAGATTATGACAGATTACGCCCCCTATCCTATCCGCAAACAGTTGGAGAAACGTAC
GGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCGATTGCCGATGTGTTCTTAATTTGCTTTTCCCTTGTGAGTCCTGC
ATCATTTGAAAATGTCCGTGCAAAGTGGTATCCTGAGGTGCGGCACCACTGTCCCAACACTCCCATCATCCTAGTGGGAA
CTAAACTTGATCTTAGGGATGATAAAGACACGATCGAGAAACTGAAGGAGAAGAAGCTGACTCCCATCACCTATCCGCAG
GGTCTAGCCATGGCTAAGGAGATTGGTGCTGTAAAATACCTGGAGTGCTCGGCGCTCACACAGCGAGGCCTCAAGACAGT
GTTTGACGAAGCGATCCGAGCAGTCCTCTGCCCGCCTCCCGTGAAGAAGAGGAAGAGAAAATGCCTGCTGTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 109 .86 RPM |
| bodymap2_lung | 367 .58 RPM |
| bodymap2_breast | 323 .35 RPM |
| bodymap2_adipose | 299 .08 RPM |
| bodymap2_adrenal | 316 .19 RPM |
| bodymap2_skeletal_muscle | 296 .79 RPM |
| bodymap2_thyroid | 299 .27 RPM |
| bodymap2_prostate | 336 .25 RPM |
| bodymap2_colon | 312 .24 RPM |
| bodymap2_testis | 223 .28 RPM |
| bodymap2_brain | 421 .92 RPM |
| bodymap2_heart | 153 .30 RPM |
| bodymap2_white_blood_cells | 226 .06 RPM |
| bodymap2_lymph_node | 226 .96 RPM |
| bodymap2_ovary | 345 .11 RPM |
| bodymap2_kidney | 226 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000070831 | other_paralog | 6 retrogenes | |
| Homo sapiens | ENSG00000119729 | other_paralog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026733 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000001847 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000018910 | ortholog_one2many | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001068 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006784 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007272 | possible_ortholog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001618 | ortholog_one2one | 2 retrogenes | |
| Xenopus tropicalis | ENSXETG00000027593 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_28 | 71.88 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1256 | 78.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1925 | 68.15 | 79.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3036 | 97.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3072 | 88.17 | 87.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_4910 | 92.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000136238 retrocopies