Parental gene:

GABARAPL1, ENSG00000139112

Aliases:GABARAPL1, APG8-LIKE, APG8L, ATG8, ATG8B, ATG8L, GEC1
Description:GABA(A) receptor-associated protein like 1 [Source:HGNC Symbol;Acc:4068]
Organism:Human (Homo sapiens)
Coordinates:12:10365056..10375727(+)


>ENSG00000139112
ATGAAGTTCCAGTACAAGGAGGACCATCCCTTTGAGTATCGGAAAAAGGAAGGAGAAAAGATCCGGAAGAAATATCCGGA
CAGGGTCCCCGTGATTGTAGAGAAGGCTCCAAAAGCCAGGGTGCCTGATCTGGACAAGAGGAAGTACCTAGTGCCCTCTG
ACCTTACTGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGAATCCACCTGAGACCTGAGGACGCCTTATTCTTCTTTGTC
AACAACACCATCCCTCCCACCAGTGCTACCATGGGCCAACTGTATGAGGACAATCATGAGGAAGACTATTTTCTGTATGT
GGCCTACAGTGATGAGAGTGTCTATGGGAAATGA

Library Parental gene expression (RPM)
bodymap2_liver 63 .24 RPM
bodymap2_lung 355 .64 RPM
bodymap2_breast 138 .91 RPM
bodymap2_adipose 321 .47 RPM
bodymap2_adrenal 50 .15 RPM
bodymap2_skeletal_muscle 227 .93 RPM
bodymap2_thyroid 217 .31 RPM
bodymap2_prostate 170 .19 RPM
bodymap2_colon 183 .23 RPM
bodymap2_testis 68 .42 RPM
bodymap2_brain 407 .60 RPM
bodymap2_heart 267 .56 RPM
bodymap2_white_blood_cells 40 .48 RPM
bodymap2_lymph_node 111 .60 RPM
bodymap2_ovary 64 .19 RPM
bodymap2_kidney 480 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000006718 ortholog_one2one 1 retrogene
retro_cpor_232,
Equus caballus ENSECAG00000014832 possible_ortholog 1 retrogene
retro_ecab_673,
Homo sapiens ENSG00000034713 within_species_paralog 1 retrogene
retro_hsap_4115,
Homo sapiens ENSG00000140941 within_species_paralog 3 retrogenes
retro_hsap_3695, retro_hsap_487, retro_hsap_62,
Gorilla gorilla ENSGGOG00000022360 possible_ortholog 1 retrogene
retro_ggor_1219,
Macropus eugenii ENSMEUG00000002873 possible_ortholog 3 retrogenes
retro_meug_1584, retro_meug_1840, retro_meug_905,
Oryctolagus cuniculus ENSOCUG00000016834 ortholog_one2one 3 retrogenes
retro_ocun_1380, retro_ocun_496, retro_ocun_697,
Sarcophilus harrisii ENSSHAG00000007434 possible_ortholog 1 retrogene
retro_shar_82,
Ictidomys tridecemlineatus ENSSTOG00000002246 ortholog_one2many 1 retrogene
retro_itri_391,
Tarsius syrichta ENSTSYG00000005307 ortholog_one2one 19 retrogenes
retro_tsyr_1045, retro_tsyr_1070, retro_tsyr_1101, retro_tsyr_1137, retro_tsyr_1308, retro_tsyr_1413, retro_tsyr_1467, retro_tsyr_1481, retro_tsyr_1671, retro_tsyr_1765, retro_tsyr_1800, retro_tsyr_234, retro_tsyr_573, retro_tsyr_761, retro_tsyr_796, retro_tsyr_832, retro_tsyr_864, retro_tsyr_978, retro_tsyr_999,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_60 93.16 100.00
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Download FASTA sequences of all ENSG00000139112 retrocopies