Parental gene: | WDR45B, ENSG00000141580 |
| Aliases: | WDR45B, WDR45L, WIPI-3, WIPI3 |
| Description: | WD repeat domain 45B [Source:HGNC Symbol;Acc:25072] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:80572437..80606429(-) |
>ENSG00000141580
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAGCT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTTGTGGACCTGGCCAGCACGGAGAAGCCACCCGTGGACATTCCTGCACACGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACGCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATCAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAGCT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTTGTGGACCTGGCCAGCACGGAGAAGCCACCCGTGGACATTCCTGCACACGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACGCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATCAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 38 .42 RPM |
| bodymap2_lung | 71 .10 RPM |
| bodymap2_breast | 61 .48 RPM |
| bodymap2_adipose | 64 .72 RPM |
| bodymap2_adrenal | 82 .98 RPM |
| bodymap2_skeletal_muscle | 20 .22 RPM |
| bodymap2_thyroid | 71 .86 RPM |
| bodymap2_prostate | 74 .82 RPM |
| bodymap2_colon | 47 .86 RPM |
| bodymap2_testis | 135 .12 RPM |
| bodymap2_brain | 93 .81 RPM |
| bodymap2_heart | 37 .83 RPM |
| bodymap2_white_blood_cells | 44 .69 RPM |
| bodymap2_lymph_node | 58 .60 RPM |
| bodymap2_ovary | 85 .20 RPM |
| bodymap2_kidney | 64 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005657 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006132 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013344 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021803 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025173 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008785 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009807 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006212 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1820 | 92.49 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1879 | 76.97 | 87.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000141580 retrocopies