Parental gene:

ATG12, ENSG00000145782

Aliases:ATG12, APG12, APG12L, FBR93, HAPG12
Description:autophagy related 12 [Source:HGNC Symbol;Acc:588]
Organism:Human (Homo sapiens)
Coordinates:5:115163892..115177555(-)


>ENSG00000145782
ATGGCGGAGGAGCCGCAGTCTGTGTTGCAGCTTCCTACTTCAATTGCTGCTGGAGGGGAAGGACTTACGGATGTCTCCCC
AGAAACAACCACCCCGGAGCCCCCGTCTTCCGCTGCAGTTTCCCCGGGAACAGAGGAACCTGCTGGCGACACCAAGAAAA
AAATTGACATTTTGCTAAAGGCTGTGGGAGACACTCCTATTATGAAAACAAAGAAGTGGGCAGTAGAGCGAACACGAACC
ATCCAAGGACTCATTGACTTCATCAAAAAGTTTCTTAAACTTGTGGCCTCAGAACAGTTGTTTATTTATGTGAATCAGTC
CTTTGCTCCTTCCCCAGACCAAGAAGTTGGAACTCTCTATGAGTGTTTTGGCAGTGATGGTAAACTGGTTTTACATTACT
GCAAGTCTCAGGCGTGGGGATGA

Library Parental gene expression (RPM)
bodymap2_adipose 37 .53 RPM
bodymap2_adrenal 51 .42 RPM
bodymap2_brain 54 .47 RPM
bodymap2_breast 53 .27 RPM
bodymap2_colon 47 .99 RPM
bodymap2_heart 28 .23 RPM
bodymap2_kidney 37 .16 RPM
bodymap2_liver 27 .61 RPM
bodymap2_lung 46 .45 RPM
bodymap2_lymph_node 81 .48 RPM
bodymap2_ovary 55 .23 RPM
bodymap2_prostate 72 .45 RPM
bodymap2_skeletal_muscle 20 .41 RPM
bodymap2_testis 48 .72 RPM
bodymap2_thyroid 47 .74 RPM
bodymap2_white_blood_cells 53 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004464 ortholog_one2one 1 retrogene
retro_chof_1745,
Cavia porcellus ENSCPOG00000007187 ortholog_one2one 2 retrogenes
retro_cpor_865, retro_cpor_944,
Equus caballus ENSECAG00000012452 ortholog_one2one 1 retrogene
retro_ecab_883,
Echinops telfairi ENSETEG00000018837 ortholog_one2one 1 retrogene
retro_etel_1721,
Gorilla gorilla ENSGGOG00000016888 ortholog_one2one 2 retrogenes
retro_ggor_1814, retro_ggor_2150,
Loxodonta africana ENSLAFG00000015307 ortholog_one2one 1 retrogene
retro_lafr_450,
Myotis lucifugus ENSMLUG00000002759 ortholog_one2one 1 retrogene
retro_mluc_2259,
Pongo abelii ENSPPYG00000015699 ortholog_one2one 3 retrogenes
retro_pabe_1518, retro_pabe_1519, retro_pabe_2158,
Pan troglodytes ENSPTRG00000017154 ortholog_one2one 2 retrogenes
retro_ptro_1240, retro_ptro_1748,
Rattus norvegicus ENSRNOG00000000157 ortholog_one2one 1 retrogene
retro_rnor_2811,
Ictidomys tridecemlineatus ENSSTOG00000011755 ortholog_one2many 1 retrogene
retro_itri_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1860 93.10 77.54
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Download FASTA sequences of all ENSG00000145782 retrocopies