Parental gene:

TSEN2, ENSG00000154743

Aliases:TSEN2, PCH2B, SEN2, SEN2L
Description:tRNA splicing endonuclease 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28422]
Organism:Human (Homo sapiens)
Coordinates:3:12525930..12581122(+)


>ENSG00000154743
ATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTGCCAATCCCTTT
TGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAATGTGATTGTGAGGAATG
CGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATT
TCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCTATCATCACATCAAAGAGGTATCAGCATAG
TGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGAGAGTACAGTGCGCAGAATCCTCAAGGATTACACGA
AACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGGCTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAAC
ATGGAAGGCACAGCAGGGGGAGAGAGACCTTCTGTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCG
TGAGCCATTAGGCTGCCTGCAGGAGGGCTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATG
CCTCACCTCTGCCCCATGTCTGTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGC
CAGCACATCGGCCTCCTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCAT
GAGCGAGAGGGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCT
TTGAGTATTTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAG
GAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCTACCA
TTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTATATCGGAAAGGCCCTC
CATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTCTCAGT
TGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTAAACCCTC
TACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGG
TTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAA

Library Parental gene expression (RPM)
bodymap2_liver 3 .27 RPM
bodymap2_lung 2 .18 RPM
bodymap2_breast 7 .26 RPM
bodymap2_adipose 4 .85 RPM
bodymap2_adrenal 16 .09 RPM
bodymap2_skeletal_muscle 6 .17 RPM
bodymap2_thyroid 11 .64 RPM
bodymap2_prostate 12 .47 RPM
bodymap2_colon 7 .58 RPM
bodymap2_testis 10 .43 RPM
bodymap2_brain 8 .81 RPM
bodymap2_heart 6 .78 RPM
bodymap2_white_blood_cells 3 .90 RPM
bodymap2_lymph_node 3 .93 RPM
bodymap2_ovary 13 .17 RPM
bodymap2_kidney 7 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000012488 ortholog_one2one 2 retrogenes
retro_ggor_1826, retro_ggor_2085,
Microcebus murinus ENSMICG00000016672 ortholog_one2one 1 retrogene
retro_mmur_883,
Macaca mulatta ENSMMUG00000007195 ortholog_one2one 1 retrogene
retro_mmul_1925,
Pongo abelii ENSPPYG00000013647 ortholog_one2one 1 retrogene
retro_pabe_2495,
Pan troglodytes ENSPTRG00000014633 ortholog_one2one 1 retrogene
retro_ptro_2035,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3011 78.51 100.00
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Download FASTA sequences of all ENSG00000154743 retrocopies