Parental gene:

TSEN2, ENSPPYG00000013647

Aliases:None
Description:tRNA splicing endonuclease 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28422]
Organism:Orangutan (Pongo abelii)
Coordinates:3:57400381..57448948(-)


>ENSPPYG00000013647
ATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTGCCAATCCCTTT
TGGTCAGGACCATGGTCCTCAGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAATGTGATTGTGAGGAATG
CAGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATT
TCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCTATCATCACATCAAAGAGGTATCAGCGTAG
TGTTGAGCGGGCAGCAGAGCTGATGTGTAGACAGGGGCAGGATGAGAGTACAGTGCGCAGAATCCTCAAGGATTACACGA
AACCGCTTGAGCATCCTCCCGTGAAAAGGAATGAAGAGGCTCAAGTGCATGACGAGCTTAACTCTGGAATGGTTTCCAAC
ATGGAAGGCACAGCAGGGGGAGTGAGACCTTCTGTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTATGGGTGATCCCAG
TGAACCATTCGGCTGCCTGCAGGAGGGCTCTGGCTGCGACCCAACAACAGATGGCTTTGAGAAAAGTATGGGAGAGGACG
CCTCACTTCTGCCCCAAGTCTGTTGCTGCAAACAAGATGCTCTCATCCTTCAGTGTGGCCCTCATCATGAAGACAGCAGC
CAGCATGTCGGCCTCCTGCATGCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGCAGTGTGCCGT
GAGTGAGAGGGAGCATGTCCCAAATGAGGAATTGGTGCAAAGAAACAGATTAATATGCAGAAGAAATCCATATAGGATCT
TTGAGTATTTGCAACTCAGCCTAGAAGAGGCCTTCTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAG
GAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACATGGCCTACCA
TTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTATTGCTATATCGGAAAGGCCCTC
CATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGCTCTCTCCGCAGGCCTTTCAGT
TGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCATTAATGTCTCTAAGGAACTTATGCTGTGCTATTTGATTAAACCCTC
TACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGG
TTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .40 RPM
SRP007412_cerebellum 13 .13 RPM
SRP007412_heart 4 .82 RPM
SRP007412_kidney 6 .23 RPM
SRP007412_liver 3 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000154743 ortholog_one2one 1 retrogene
retro_hsap_3011,
Gorilla gorilla ENSGGOG00000012488 ortholog_one2one 2 retrogenes
retro_ggor_1826, retro_ggor_2085,
Microcebus murinus ENSMICG00000016672 ortholog_one2one 1 retrogene
retro_mmur_883,
Macaca mulatta ENSMMUG00000007195 ortholog_one2one 1 retrogene
retro_mmul_1925,
Pan troglodytes ENSPTRG00000014633 ortholog_one2one 1 retrogene
retro_ptro_2035,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2495 81.62 100.00
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Download FASTA sequences of all ENSPPYG00000013647 retrocopies