Parental gene: | FBLIM1, ENSG00000162458 |
| Aliases: | FBLIM1, CAL, FBLP-1, FBLP1 |
| Description: | filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:24686] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:16083101..16113089(+) |
>ENSG00000162458
ATGGCCTCAAAGCCTGAGAAGAGGGTGGCATCGTCTGTCTTTATCACCCTGGCACCCCCGCGCCGCGATGTGGCCGTGGC
GGAGGAAGTGAGGCAGGCAGTTTGTGAGGCCCGGCGTGGCCGCCCCTGGGAGGCTCCTGCCCCCATGAAGACACCCGAGG
CTGGCTTGGCGGGGAGGCCCAGCCCCTGGACAACCCCTGGCAGAGCTGCAGCCACAGTGCCGGCTGCACCTATGCAGCTC
TTCAATGGAGGATGCCCACCCCCTCCTCCTGTCCTGGATGGTGAGGACGTGCTTCCTGACCTGGACCTCCTCCCACCCCC
TCCACCGCCCCCTCCAGTGCTTCTGCCTTCTGAAGAGGAGGCTCCTGCTCCAATGGGGGCCTCACTCATTGCAGACTTAG
AGCAGCTGCACCTGTCCCCGCCCCCGCCCCCACCACAGGCCCCAGCGGAGGGACCTTCAGTCCAGCCCGGTCCCCTCAGG
CCCATGGAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAGAAAGGGGCATCCACAGACATCTGTGCCTTCTGCCA
CAAGACCGTGTCCCCCCGAGAGCTGGCTGTGGAGGCCATGAAGAGGCAGTACCATGCCCAGTGCTTCACGTGCCGCACCT
GCCGCCGCCAGCTGGCTGGGCAGAGCTTCTACCAGAAGGATGGGCGACCCCTCTGCGAACCCTGCTACCAGGACACACTG
GAGAGGTGCGGCAAGTGTGGCGAGGTGGTCCGGGACCACATCATCAGGGCCCTGGGCCAGGCCTTCCACCCCTCCTGCTT
CACGTGTGTGACCTGCGCCCGGTGCATTGGGGATGAGAGCTTTGCCCTGGGCAGCCAGAACGAGGTGTACTGCCTGGACG
ACTTCTACAGGTACGAGAAGGGTTTGTGCACTGGGTGGGGTGCAGGGACAGGGCGAGACCCAAGCAGGGTGAAGGAGCTG
AGCTTGAGTCCTGGGTGCTGGGCCAGAGTTTCCTGTCTACTGGTTTATTATAAAGAATATTACAGGGCTGGGCTGGGCGC
GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGATCATCCTG
GCTAA
ATGGCCTCAAAGCCTGAGAAGAGGGTGGCATCGTCTGTCTTTATCACCCTGGCACCCCCGCGCCGCGATGTGGCCGTGGC
GGAGGAAGTGAGGCAGGCAGTTTGTGAGGCCCGGCGTGGCCGCCCCTGGGAGGCTCCTGCCCCCATGAAGACACCCGAGG
CTGGCTTGGCGGGGAGGCCCAGCCCCTGGACAACCCCTGGCAGAGCTGCAGCCACAGTGCCGGCTGCACCTATGCAGCTC
TTCAATGGAGGATGCCCACCCCCTCCTCCTGTCCTGGATGGTGAGGACGTGCTTCCTGACCTGGACCTCCTCCCACCCCC
TCCACCGCCCCCTCCAGTGCTTCTGCCTTCTGAAGAGGAGGCTCCTGCTCCAATGGGGGCCTCACTCATTGCAGACTTAG
AGCAGCTGCACCTGTCCCCGCCCCCGCCCCCACCACAGGCCCCAGCGGAGGGACCTTCAGTCCAGCCCGGTCCCCTCAGG
CCCATGGAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAGAAAGGGGCATCCACAGACATCTGTGCCTTCTGCCA
CAAGACCGTGTCCCCCCGAGAGCTGGCTGTGGAGGCCATGAAGAGGCAGTACCATGCCCAGTGCTTCACGTGCCGCACCT
GCCGCCGCCAGCTGGCTGGGCAGAGCTTCTACCAGAAGGATGGGCGACCCCTCTGCGAACCCTGCTACCAGGACACACTG
GAGAGGTGCGGCAAGTGTGGCGAGGTGGTCCGGGACCACATCATCAGGGCCCTGGGCCAGGCCTTCCACCCCTCCTGCTT
CACGTGTGTGACCTGCGCCCGGTGCATTGGGGATGAGAGCTTTGCCCTGGGCAGCCAGAACGAGGTGTACTGCCTGGACG
ACTTCTACAGGTACGAGAAGGGTTTGTGCACTGGGTGGGGTGCAGGGACAGGGCGAGACCCAAGCAGGGTGAAGGAGCTG
AGCTTGAGTCCTGGGTGCTGGGCCAGAGTTTCCTGTCTACTGGTTTATTATAAAGAATATTACAGGGCTGGGCTGGGCGC
GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGATCATCCTG
GCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 1 .61 RPM |
| bodymap2_lung | 64 .43 RPM |
| bodymap2_breast | 19 .90 RPM |
| bodymap2_adipose | 37 .23 RPM |
| bodymap2_adrenal | 132 .36 RPM |
| bodymap2_skeletal_muscle | 2 .53 RPM |
| bodymap2_thyroid | 18 .91 RPM |
| bodymap2_prostate | 56 .03 RPM |
| bodymap2_colon | 45 .92 RPM |
| bodymap2_testis | 124 .56 RPM |
| bodymap2_brain | 3 .94 RPM |
| bodymap2_heart | 44 .97 RPM |
| bodymap2_white_blood_cells | 0 .10 RPM |
| bodymap2_lymph_node | 89 .50 RPM |
| bodymap2_ovary | 106 .99 RPM |
| bodymap2_kidney | 38 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018725 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015190 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000032243 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001837 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000208 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_778 | 87.67 | 77.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4898 | 83.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000162458 retrocopies